PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026454408.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CPP

Protein Properties

Length: 957aa MW: 104077 Da PI: 6.4584

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026454408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5.2e-16	541	579	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++gCnCkkskClk+YCeCfaag +Cs+ C+C +C+Nk e XP_026454408.1 541 CRGCNCKKSKCLKLYCECFAAGMYCSDFCSCVGCFNKPE 579 79**********************************976 PP
2	TCR	52.5	9.5e-17	620	658	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++ag+ Cs+ C+Ce+C+N XP_026454408.1 620 RHKRGCNCKKSKCLKKYCECYQAGVGCSDGCRCEGCQNA 658 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MDSPERTQIT SPSPVQDSPL FNFLSTLSPI KPVKSRTAAQ GFTEYNFPSP VFTSPRINPQ 60 RETGFSKGSQ CVLLSKMKPS VEEEADGSFA SEQSITKSIG DGRTSCSSKE CNKDSEQTIP 120 RSSPGSVREY LADTVVVGKA DVVNSTASTE LLVNQAHDVS HGCISSKENL ANLANDPVAK 180 DTEAEAVASH TLLETAEEDL LVTEPVSGEQ PAIVANQMEP TSVEADADGP ACSISLYHHS 240 LQDAEVSQQS ALECTRQLPC ESLQMTQAHD DRDEIQGVTY DGSVESSVFY DCEEGNQQQR 300 GTLRRCLQFE TAQAQGNTFC NSSWNAPNDL NSRSPASSTD LEIGAPLQRK SRSASRSSQP 360 VNTSRRITSK KFTITRVTTI ETHEVGRSTR NSVISSAKVR MPSIGLHLNS IVNTSASSKF 420 IAKSCSSSHS RKTLCITEQD LRDSSVNPSL STGKFSDTLD NNQQGSLATA RESAATFPSS 480 RDMNLMNEVL NFEEENVDHA TPCDSWNTAS ENSLRFEEFS EPPSKKRRKK TPQSIDSSEG 540 CRGCNCKKSK CLKLYCECFA AGMYCSDFCS CVGCFNKPEY EATVLATRHQ IESRNPDAFA 600 PKVLGTYKEI GNQVTPSSGR HKRGCNCKKS KCLKKYCECY QAGVGCSDGC RCEGCQNAFG 660 VRGGYDESRE MLYRKIEDEK WDDSSGDKLE MANRSNLLQL ELELPNPDNL SPLTPMFQSS 720 NHGKDTAKSR LQASRYDPSP ESERQLKTDQ GTSDVITRDL ESECSIAGSA NPVLQRHDEL 780 TDLCDLTPLP NILSSRAKAS SSSSKSAGSA KASEGRLHPG SVSLSSAASH GWRGSPVTPL 840 PRLGVNKYPQ EPDSDKSTLC QIQEDDTPEI LKDTRTPIKA VKASSPSQKR VSPPQNHSPE 900 PRLTCSPSLI RSPSLTGSPR LTCSPSLKSG RKFVLRSISA FPPLTPYSDP KGGRTDK

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MDSPERTQIT SPSPVQDSPL FNFLSTLSPI KPVKSRTAAQ GFTEYNFPSP VFTSPRINPQ  60
RETGFSKGSQ CVLLSKMKPS VEEEADGSFA SEQSITKSIG DGRTSCSSKE CNKDSEQTIP  120
RSSPGSVREY LADTVVVGKA DVVNSTASTE LLVNQAHDVS HGCISSKENL ANLANDPVAK  180
DTEAEAVASH TLLETAEEDL LVTEPVSGEQ PAIVANQMEP TSVEADADGP ACSISLYHHS  240
LQDAEVSQQS ALECTRQLPC ESLQMTQAHD DRDEIQGVTY DGSVESSVFY DCEEGNQQQR  300
GTLRRCLQFE TAQAQGNTFC NSSWNAPNDL NSRSPASSTD LEIGAPLQRK SRSASRSSQP  360
VNTSRRITSK KFTITRVTTI ETHEVGRSTR NSVISSAKVR MPSIGLHLNS IVNTSASSKF  420
IAKSCSSSHS RKTLCITEQD LRDSSVNPSL STGKFSDTLD NNQQGSLATA RESAATFPSS  480
RDMNLMNEVL NFEEENVDHA TPCDSWNTAS ENSLRFEEFS EPPSKKRRKK TPQSIDSSEG  540
CRGCNCKKSK CLKLYCECFA AGMYCSDFCS CVGCFNKPEY EATVLATRHQ IESRNPDAFA  600
PKVLGTYKEI GNQVTPSSGR HKRGCNCKKS KCLKKYCECY QAGVGCSDGC RCEGCQNAFG  660
VRGGYDESRE MLYRKIEDEK WDDSSGDKLE MANRSNLLQL ELELPNPDNL SPLTPMFQSS  720
NHGKDTAKSR LQASRYDPSP ESERQLKTDQ GTSDVITRDL ESECSIAGSA NPVLQRHDEL  780
TDLCDLTPLP NILSSRAKAS SSSSKSAGSA KASEGRLHPG SVSLSSAASH GWRGSPVTPL  840
PRLGVNKYPQ EPDSDKSTLC QIQEDDTPEI LKDTRTPIKA VKASSPSQKR VSPPQNHSPE  900
PRLTCSPSLI RSPSLTGSPR LTCSPSLKSG RKFVLRSISA FPPLTPYSDP KGGRTDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	525	529	KKRRK
2	525	530	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	7e-59	CPP family protein