PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026454153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25543 Da PI: 9.0775 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.6e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien+snrqvtf+kRrng+lKKA+ELS+LCdaeva+i+fss+g+lyey+ XP_026454153.1 9 KRIENTSNRQVTFCKRRNGLLKKAYELSILCDAEVALIVFSSRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 112.4 | 4.5e-37 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++s ea+a ++qqe++kLk++i+ Lq+++Rhl+Ge+++sL++keL+qLe++Le++l++iRskKnel++++ie++q+ke elq+en Lr+k+ XP_026454153.1 79 NTTSIIEANAHYYQQEATKLKQQIQILQNTNRHLMGESISSLTVKELKQLENRLERGLTRIRSKKNELMFAEIEYMQRKEVELQKENVFLRAKVT 173 455578999***********************************************************************************997 PP K-box 100 e 100 e XP_026454153.1 174 E 174 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MGRGKIEIKR IENTSNRQVT FCKRRNGLLK KAYELSILCD AEVALIVFSS RGRLYEYANS 60 SIKSTIERYK KVCSAECSNT TSIIEANAHY YQQEATKLKQ QIQILQNTNR HLMGESISSL 120 TVKELKQLEN RLERGLTRIR SKKNELMFAE IEYMQRKEVE LQKENVFLRA KVTEDEENEQ 180 TNLRPVPDQL DHHQVNYFQV NMLNAGPSSY SDHQTALHLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 5e-94 | MIKC_MADS family protein |