PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453646.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 289aa    MW: 32362.4 Da    PI: 5.7886
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260116.61.5e-36551551100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaCk++r+kC++dC lapyfp +++ +f n+hklFG+sn++k++k+l ++ e+e+am+s++++AearardPv G++ +i++lq q+++ k+el
  XP_026453646.1  55 ACAACKYQRKKCSSDCLLAPYFPPTHQTEFLNTHKLFGVSNICKIIKSLdNPVEKETAMRSMIFQAEARARDPVGGCAHLIRDLQFQIARCKEEL 149
                     7************************************************66677***************************************** PP

          DUF260  95 allkee 100
                     +l+ ++
  XP_026453646.1 150 ELVYHQ 155
                     *99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MPQKQQQTIF PPPEMMPRNL QTQASLNTCS QKLTTKISAS SSSTTTTTHS SSSSACAACK  60
YQRKKCSSDC LLAPYFPPTH QTEFLNTHKL FGVSNICKII KSLDNPVEKE TAMRSMIFQA  120
EARARDPVGG CAHLIRDLQF QIARCKEELE LVYHQIAMCR AAAQAQSVID VNVNVVPPLP  180
SDNEEDRGII NNQNLLDGYN HQNMLQQFQD MQHQRQPYNV IPVNQVVIQD YDDVAVLNQI  240
WSMESLANQN DALNMIESKH APSSISSSSP VMDDHNQQQQ SSIEDPDVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.13e-41LBD family protein