PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026453645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 289aa MW: 32362.4 Da PI: 5.7886 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 116.6 | 1.5e-36 | 55 | 155 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk++r+kC++dC lapyfp +++ +f n+hklFG+sn++k++k+l ++ e+e+am+s++++AearardPv G++ +i++lq q+++ k+el XP_026453645.1 55 ACAACKYQRKKCSSDCLLAPYFPPTHQTEFLNTHKLFGVSNICKIIKSLdNPVEKETAMRSMIFQAEARARDPVGGCAHLIRDLQFQIARCKEEL 149 7************************************************66677***************************************** PP DUF260 95 allkee 100 +l+ ++ XP_026453645.1 150 ELVYHQ 155 *99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MPQKQQQTIF PPPEMMPRNL QTQASLNTCS QKLTTKISAS SSSTTTTTHS SSSSACAACK 60 YQRKKCSSDC LLAPYFPPTH QTEFLNTHKL FGVSNICKII KSLDNPVEKE TAMRSMIFQA 120 EARARDPVGG CAHLIRDLQF QIARCKEELE LVYHQIAMCR AAAQAQSVID VNVNVVPPLP 180 SDNEEDRGII NNQNLLDGYN HQNMLQQFQD MQHQRQPYNV IPVNQVVIQD YDDVAVLNQI 240 WSMESLANQN DALNMIESKH APSSISSSSP VMDDHNQQQQ SSIEDPDVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 3e-41 | LBD family protein |