PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453450.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 280aa    MW: 31502.7 Da    PI: 5.917
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.98.3e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+a++
  XP_026453450.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPLGDRCEAAVTISYEAQARIQDPVYGCVSHIFALQQQVVSLQAQI 101
                     7*************************89******************************************************************* PP

          DUF260  95 allkee 100
                     a+l+++
  XP_026453450.1 102 ATLRAQ 107
                     *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPLGD  60
RCEAAVTISY EAQARIQDPV YGCVSHIFAL QQQVVSLQAQ IATLRAQQAA QGFVNGGNIN  120
TSTNDHIHQQ DNHNKLFYGD FPTTYPQNIQ ALNMQLNESK VLSEQLYQNN SSMNDSNNTT  180
TTDENMFYYE NGVVNMEDSP SNHMSHEYHA QSSTPPEETV HQFLTSTSFD DQYSSDEHHR  240
HAAMASQYLD DMQMTARKWT FQDTDQVDLQ SMACAYFQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.11e-55LBD family protein