PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453176.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 395aa MW: 44590.1 Da PI: 7.4746

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.3	1.6e-20	127	217	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y++Y++e GF +r+++++k +r +++t+ f+Cs+eg ++++ + + k+++ r++ rt+Cka++++ ++ ++ w+v+++ +HnH ++ XP_026453176.1 127 YQDYGRENGFIIRRRSTYKAQRGRRVTRVLFTCSCEGLHKKKCSVddEGKTKKARSTMRTNCKAMMRIIWDRdSDDWVVNDFTDDHNHVMV 217 9**********************************988876554478889999********9988879************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MYSSPAKISA KKRFLAHMTA VQNTETDMTE DIGETTAENI ENKAADSTES KADDSTENTA 60 DEDIENTTSG NVENRGNEDN GSRPVESIEK INEAEGHIVP FPSSGTKPKR PYVGMIFSSI 120 REAEVSYQDY GRENGFIIRR RSTYKAQRGR RVTRVLFTCS CEGLHKKKCS VDDEGKTKKA 180 RSTMRTNCKA MMRIIWDRDS DDWVVNDFTD DHNHVMVTPT KRVLMGSNKY MPHSIMTKWM 240 KDANRDEADL PNEFLMHDRL VGTEAMRISH LCRRSTQLAY LAGRSEDGYK VVMDILDQAF 300 EKIKQLDTAV NEKAEKPADI IIADAVILPP ISQEKGTKRV RKGKDKATEV TSETYQSRSG 360 IDTSVGYKRP RVCKTCSGQG HDTRNCRFAE EPICN

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MYSSPAKISA KKRFLAHMTA VQNTETDMTE DIGETTAENI ENKAADSTES KADDSTENTA  60
DEDIENTTSG NVENRGNEDN GSRPVESIEK INEAEGHIVP FPSSGTKPKR PYVGMIFSSI  120
REAEVSYQDY GRENGFIIRR RSTYKAQRGR RVTRVLFTCS CEGLHKKKCS VDDEGKTKKA  180
RSTMRTNCKA MMRIIWDRDS DDWVVNDFTD DHNHVMVTPT KRVLMGSNKY MPHSIMTKWM  240
KDANRDEADL PNEFLMHDRL VGTEAMRISH LCRRSTQLAY LAGRSEDGYK VVMDILDQAF  300
EKIKQLDTAV NEKAEKPADI IIADAVILPP ISQEKGTKRV RKGKDKATEV TSETYQSRSG  360
IDTSVGYKRP RVCKTCSGQG HDTRNCRFAE EPICN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	3e-14	FAR1 family protein