PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453160.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 401aa MW: 44055.3 Da PI: 8.8851

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	9.1e-18	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F+ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_026453160.1 57 KPRWNPKPEQIRILEAIFNAgMVNPPRDEIRKIRAQLqeygQVADANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.3	5.3e-36	56	119	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe+++++G+++P+++ei++i+a+L+eyG++ d+NVfyWFQNrk+R+++kq XP_026453160.1 56 PKPRWNPKPEQIRILEAIFNAGMVNPPRDEIRKIRAQLQEYGQVADANVFYWFQNRKSRSKHKQ 119 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MASSNRHWPS MFKSKPCDSH PQWQHEINPS SLMSSCQRPS YTPSAPAGNE ERTLEPKPRW 60 NPKPEQIRIL EAIFNAGMVN PPRDEIRKIR AQLQEYGQVA DANVFYWFQN RKSRSKHKQR 120 HSTKSSSINN IYHQPSPKTL TAPSSSSSSS SEKASPKKTS NNKKNIAAMG TTGVNFVDAL 180 NSPTDSVNQT YFQTTQGELI SSSPDPFFFS ATMPVQQSGI SSTGFTQGFC FSELPNVIQY 240 PSQNHHQGIG HCSSLLLGEL LHHGSTLKKD EAVDKLKDWK KLSYTTTSIT KTSIPSTVID 300 TIPSSTITST TTGSTLIHDI QGGGGIGESG DIGPCIVAKS TVFINDIEFE VSMGPLNVRQ 360 AFGYDAVLIH SSGQPVFTNE WGFTLQSLQP GASYYLVRIF S

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MASSNRHWPS MFKSKPCDSH PQWQHEINPS SLMSSCQRPS YTPSAPAGNE ERTLEPKPRW  60
NPKPEQIRIL EAIFNAGMVN PPRDEIRKIR AQLQEYGQVA DANVFYWFQN RKSRSKHKQR  120
HSTKSSSINN IYHQPSPKTL TAPSSSSSSS SEKASPKKTS NNKKNIAAMG TTGVNFVDAL  180
NSPTDSVNQT YFQTTQGELI SSSPDPFFFS ATMPVQQSGI SSTGFTQGFC FSELPNVIQY  240
PSQNHHQGIG HCSSLLLGEL LHHGSTLKKD EAVDKLKDWK KLSYTTTSIT KTSIPSTVID  300
TIPSSTITST TTGSTLIHDI QGGGGIGESG DIGPCIVAKS TVFINDIEFE VSMGPLNVRQ  360
AFGYDAVLIH SSGQPVFTNE WGFTLQSLQP GASYYLVRIF S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-55	WOX family protein