PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026452806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 293aa MW: 32782.8 Da PI: 5.5171 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 118.5 | 4.1e-37 | 59 | 160 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk++r+kC++dC lapyfp +++ +f n+hklFG+sn++k++k+l ++ e+e+am+s++++AearardPv G++ +i++lq q+++ k+el XP_026452806.1 59 ACAACKYQRKKCSSDCLLAPYFPPTHQTEFLNTHKLFGVSNICKIIKSLdNPVEKETAMRSMIFQAEARARDPVGGCAHLIRDLQFQIARCKEEL 153 7************************************************66677***************************************** PP DUF260 95 allkeel 101 +l+++++ XP_026452806.1 154 DLVHHQI 160 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MPQKQQLTIF PPPEMMPRNL QSQASLNTCS QKLTTKISAS SSSTPSPTTT THSSSSSSAC 60 AACKYQRKKC SSDCLLAPYF PPTHQTEFLN THKLFGVSNI CKIIKSLDNP VEKETAMRSM 120 IFQAEARARD PVGGCAHLIR DLQFQIARCK EELDLVHHQI AMCRAAAQAQ SVIDVNVNVV 180 PPLPSDNEED RGIINNQNLL DGYNHQNMLQ QFQDMQHQRQ PYNVIPENQV VIQDYDDVAV 240 LNQIWSMESL ANQNDALNMI ESKHTPSSIF SSSPVMDDHN QEQQSSIEDP DVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 6e-40 | LBD family protein |