PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452805.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 293aa MW: 32782.8 Da PI: 5.5171

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	118.5	4.1e-37	59	160	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk++r+kC++dC lapyfp +++ +f n+hklFG+sn++k++k+l ++ e+e+am+s++++AearardPv G++ +i++lq q+++ k+el XP_026452805.1 59 ACAACKYQRKKCSSDCLLAPYFPPTHQTEFLNTHKLFGVSNICKIIKSLdNPVEKETAMRSMIFQAEARARDPVGGCAHLIRDLQFQIARCKEEL 153 7**********************************************66677************************************* PP DUF260 95 allkeel 101 +l+++++ XP_026452805.1 154 DLVHHQI 160 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MPQKQQLTIF PPPEMMPRNL QSQASLNTCS QKLTTKISAS SSSTPSPTTT THSSSSSSAC 60 AACKYQRKKC SSDCLLAPYF PPTHQTEFLN THKLFGVSNI CKIIKSLDNP VEKETAMRSM 120 IFQAEARARD PVGGCAHLIR DLQFQIARCK EELDLVHHQI AMCRAAAQAQ SVIDVNVNVV 180 PPLPSDNEED RGIINNQNLL DGYNHQNMLQ QFQDMQHQRQ PYNVIPENQV VIQDYDDVAV 240 LNQIWSMESL ANQNDALNMI ESKHTPSSIF SSSPVMDDHN QEQQSSIEDP DVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	6e-40	LBD family protein