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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026452736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | AP2 | ||||||||
Protein Properties | Length: 189aa MW: 21518.3 Da PI: 9.9658 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45 | 2.7e-14 | 110 | 168 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++d ++g A+I+d + g ++ k+++lgk++ ++ Aaka++ a++k++g XP_026452736.1 110 SQYRGVTRDVRKGIHKAQIWDgSCRkEGiRKgKQVYLGKYDEEDAAAKAYDLAALKYFG 168 78*******************65555668446**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MEAGDSKSRR KISPRLLDLN SEWAVEEERR LFGGIEERKL ELKLGPPNEE EKGFSNGSNR 60 KNIVKSPSSN TLNSTVNKTP ISLLFTSTLT STTTTNNTFH YNYKKKQKIS QYRGVTRDVR 120 KGIHKAQIWD GSCRKEGIRK GKQVYLGKYD EEDAAAKAYD LAALKYFGPT ARINFPLANY 180 ETEIKEMEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 7e-19 | AP2 family protein |