PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026452695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 141aa MW: 16236.7 Da PI: 10.2134 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.1 | 2e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRrng++KKA+ELS+LCdaev +i+fsst+klye+ss XP_026452695.1 10 KIDNITSRQVTFSKRRNGLIKKAKELSILCDAEVGLIVFSSTDKLYEFSS 59 69**********************************************96 PP | |||||||
2 | K-box | 62.9 | 1.2e-21 | 76 | 140 | 8 | 69 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++++a+ +++e+a k + +nLq+ +R+++G++L sLs keLq+Le+qLe sl+ +R +K XP_026452695.1 76 NsllNATTEAKFWKREAATFKHQFQNLQEGHRKMMGQELCSLSAKELQNLENQLEMSLRGVRMQK 140 3356788999****************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MGRGKIVIRK IDNITSRQVT FSKRRNGLIK KAKELSILCD AEVGLIVFSS TDKLYEFSST 60 SMNSLLERYD TSKEENSLLN ATTEAKFWKR EAATFKHQFQ NLQEGHRKMM GQELCSLSAK 120 ELQNLENQLE MSLRGVRMQK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-66 | MIKC_MADS family protein |