PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452689.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 635aa MW: 72457.8 Da PI: 5.61

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.1	3.8e-20	41	123	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YAk+v F vrk++++k+ ++g i + t+vCs+ g++ + +k+ ++r+++r++Cka ++ ++++++kw t+l+l+HnH+ XP_026452689.1 41 YKAYAKRVRFAVRKRTNRKN-EEGIIRSVTYVCSRAGNPVNMTKN---IVKPRKSNRCDCKAYVTARLDDEDKWDFTQLKLDHNHTY 123 9*************9998.8888***********99888...99*********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MVAASLDDAE KETGEKMQST DEDEFYIGKK FETHDDLFNS YKAYAKRVRF AVRKRTNRKN 60 EEGIIRSVTY VCSRAGNPVN MTKNIVKPRK SNRCDCKAYV TARLDDEDKW DFTQLKLDHN 120 HTYNPSRHYQ QHRKVEPHVL HTIDLNDQSR IPVEKTFRSV VNQFGGFDKV DCNEKDCRNA 180 LDVIHRLRLG EGDATALMKY LSNKVKDNSV FYFEVDYDDE NCLKNVFWAD GWSREAYKEF 240 GEVISFDATY MTNDYEIPFT PFIGVNHHGQ SILLGCGLLC NETTETFVWL FKKWLKCMSG 300 CAPRAIITDQ CQAMKNAVEI IYPEARHRCL EKKKVEKELI ADAESCSNSI PVLSGGYPFE 360 KQLWDMYTLV KFQEFHKEIC GKIACKVVEF DEESEVYNSE EEDDDIDIQV VDDGEVMDDL 420 ETDNESGTDE SETTRSEAEK SDTDDSENEE CVLDKTADET ETTEAKKRKK CVDFDIHCRC 480 KLFESKGTLC RHAIVDIITN IPNLRLNDMH VTRESVATPT PSYLHDISHQ QHTEATRGRG 540 TRGRVTRGRG TRGRGTRGRG AHGNAAQLSN NASTFASVGM YMHVPAEAPY INPPYYYGGI 600 NNFGAAYADH SVHDRVVTPT APHTPSSEGF IQRRS

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MVAASLDDAE KETGEKMQST DEDEFYIGKK FETHDDLFNS YKAYAKRVRF AVRKRTNRKN  60
EEGIIRSVTY VCSRAGNPVN MTKNIVKPRK SNRCDCKAYV TARLDDEDKW DFTQLKLDHN  120
HTYNPSRHYQ QHRKVEPHVL HTIDLNDQSR IPVEKTFRSV VNQFGGFDKV DCNEKDCRNA  180
LDVIHRLRLG EGDATALMKY LSNKVKDNSV FYFEVDYDDE NCLKNVFWAD GWSREAYKEF  240
GEVISFDATY MTNDYEIPFT PFIGVNHHGQ SILLGCGLLC NETTETFVWL FKKWLKCMSG  300
CAPRAIITDQ CQAMKNAVEI IYPEARHRCL EKKKVEKELI ADAESCSNSI PVLSGGYPFE  360
KQLWDMYTLV KFQEFHKEIC GKIACKVVEF DEESEVYNSE EEDDDIDIQV VDDGEVMDDL  420
ETDNESGTDE SETTRSEAEK SDTDDSENEE CVLDKTADET ETTEAKKRKK CVDFDIHCRC  480
KLFESKGTLC RHAIVDIITN IPNLRLNDMH VTRESVATPT PSYLHDISHQ QHTEATRGRG  540
TRGRVTRGRG TRGRGTRGRG AHGNAAQLSN NASTFASVGM YMHVPAEAPY INPPYYYGGI  600
NNFGAAYADH SVHDRVVTPT APHTPSSEGF IQRRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	466	470	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-55	FAR1 family protein