PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026452585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 194aa MW: 21904.1 Da PI: 9.1429 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 190.4 | 8.7e-59 | 10 | 163 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ ++ +++++ + ++ ++++++ +v + XP_026452585.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQDL--------QTPNNGDHFQRIDFPSSSKHNQDIQVMQ 96 5789********************************************99999998884........4556666666666666666665544444 PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + ++ + v++PPek+ rvPsayn+fikeeiqrika+nPdi hr afs+aaknWahfP++h+gl XP_026452585.1 97 VT----TAAKTEK-RIVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKAFSTAAKNWAHFPHAHYGL 163 22....2222222.3479****************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 194 aa Download sequence |
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQT PNNGDHFQRI DFPSSSKHNQ DIQVMQVTTA AKTEKRIVNQ PPEKKHRVPS 120 AYNQFIKEEI QRIKANNPDI NHRKAFSTAA KNWAHFPHAH YGLKLESKNN QAKLREESCK 180 MFAAYKSCTI LGKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-77 | YABBY family protein |