PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452146.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 369aa    MW: 42722.2 Da    PI: 6.5754
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.61.8e-1763156190
            FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     ++Y eY+++ GF++r+++++k+    ge+t +  vCs+egk+e++++    +k+ ++ +  ++gC+ k++v  ++ ++ w v+ ++ +HnH+++
  XP_026452146.1  63 EYYIEYGRRNGFTIRVRSTNKTlVSLGEVTAAYTVCSREGKHEKKENVegIDKKGKRCSIIKCGCDTKMHVLFNEeNNIWTVMAFSDDHNHKFV 156
                     59***************9999978899***************9998876667777788999**********99998***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MDGFSDSLSA ASERDMTEDE FTKNSLEEKE NANDIPVTPG KNSSSITTPY EGMEFKSYKD  60
AKEYYIEYGR RNGFTIRVRS TNKTLVSLGE VTAAYTVCSR EGKHEKKENV EGIDKKGKRC  120
SIIKCGCDTK MHVLFNEENN IWTVMAFSDD HNHKFVSPTK RIRMRSNRYM PEGVKDMTEV  180
FNLENIEVGK VPLVFGGATI GFNKRDCWNH LFNVRHKNLE VGDAQSIMDY LHMRQSENPQ  240
FFYRVQVDEH GRAVNFFWVD ARSRMSYEQF GEVVFFDTTY RTNKYDMPFA PFTGVNHHYQ  300
TIQFGCALLQ DETEITFQWL FHIWLESMGE KHPLAIITDQ DTAMALAIKK VFPNSTSPSL  360
PMAHKEKIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-65FAR1 family protein