PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452127.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 618aa MW: 72354.4 Da PI: 8.8364

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.4	1.5e-20	11	96	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA ++GFsvrks+++ ++g+ +r +vCs +g+ree+k++ ++ +++raetr gC a++k++++ d k++v+k+ H+H XP_026452127.1 11 KFYNAYAFMMGFSVRKSRTHLF-QDGKLRDRLYVCSAQGTREEDKRD-DTVQNHRAETRFGCLAEMKINRTPDCKYRVSKFFPYHTHV 96 6**************99998.7888*************999.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR LYVCSAQGTR EEDKRDDTVQ 60 NHRAETRFGC LAEMKINRTP DCKYRVSKFF PYHTHVTTTP SKSHLFRSHR KLNIANAAQA 120 DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT KRTRKIKYGE TGGVLEYLQK 180 MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV VCFNTTFTKN KEGRPFAMFV 240 GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP KSIFTDQDAA MAKALASQWP 300 ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY EDEEEFTNAW FKMLEKYNLN 360 GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL VKRYVSYKYD LLRFFENFER 420 LVDDRRYEEK RMDFRASQST PTLSFPVKFL NHAASVYTPA IFKLFQIQLC RAHDCSFRCF 480 NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF EFAGYLCSHA LKILCVKDIK 540 SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY RELCRSYIQL ATRAAESEEV 600 YEIAKILIYC ALSLPSGR

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR LYVCSAQGTR EEDKRDDTVQ  60
NHRAETRFGC LAEMKINRTP DCKYRVSKFF PYHTHVTTTP SKSHLFRSHR KLNIANAAQA  120
DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT KRTRKIKYGE TGGVLEYLQK  180
MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV VCFNTTFTKN KEGRPFAMFV  240
GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP KSIFTDQDAA MAKALASQWP  300
ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY EDEEEFTNAW FKMLEKYNLN  360
GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL VKRYVSYKYD LLRFFENFER  420
LVDDRRYEEK RMDFRASQST PTLSFPVKFL NHAASVYTPA IFKLFQIQLC RAHDCSFRCF  480
NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF EFAGYLCSHA LKILCVKDIK  540
SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY RELCRSYIQL ATRAAESEEV  600
YEIAKILIYC ALSLPSGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-127	FAR1 family protein