PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451052.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 422aa MW: 49064.2 Da PI: 8.8264

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.9	9e-20	45	126	1	87
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+YA+++GFsv+k++ kk+ ng ++ ++Cskegk+ + +++ + +++rtgCkak+ ++ +kw+++ + l+HnH XP_026451052.1 45 EFYNNYAYKTGFSVKKRTCKKE--NGVLVHVSYTCSKEGKNIKASNT---PLNLPPTQRTGCKAKISARLCAYDKWMISVVFLQHNH 126 6**************99988..9************999887...888999***************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MNENELEIEE PEKSGSVLDD DSNHGDQTVE PKLGMRFENA DELFEFYNNY AYKTGFSVKK 60 RTCKKENGVL VHVSYTCSKE GKNIKASNTP LNLPPTQRTG CKAKISARLC AYDKWMISVV 120 FLQHNHLNSP SKARHLRGHK RINTAIKKRV LLNDKAGIRM CKTYGALAVE GGGYENLPYD 180 EKTLRNMIAR EKVLELGEGD ATTLLDHFTD MQNKDPNFFY RLDIDGESRL KNVFWADNRC 240 REAYKEFGEV VTFDTTYFTN KYDIPFASFV KVNHHGQSIL LGCGLLSNEE KETFSWLFKA 300 WIDCMNEVAP GGIITDQAGA MKISIEIVLK DTKHRWCLWR IMKKIPEKLR RYDNCVRIKS 360 RMKKAVYDSQ FLAEFEERWS EMLEKYESLK QNKWLRKLYR EKDRCIPCFV KTTFWAGMST 420 TQ

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MNENELEIEE PEKSGSVLDD DSNHGDQTVE PKLGMRFENA DELFEFYNNY AYKTGFSVKK  60
RTCKKENGVL VHVSYTCSKE GKNIKASNTP LNLPPTQRTG CKAKISARLC AYDKWMISVV  120
FLQHNHLNSP SKARHLRGHK RINTAIKKRV LLNDKAGIRM CKTYGALAVE GGGYENLPYD  180
EKTLRNMIAR EKVLELGEGD ATTLLDHFTD MQNKDPNFFY RLDIDGESRL KNVFWADNRC  240
REAYKEFGEV VTFDTTYFTN KYDIPFASFV KVNHHGQSIL LGCGLLSNEE KETFSWLFKA  300
WIDCMNEVAP GGIITDQAGA MKISIEIVLK DTKHRWCLWR IMKKIPEKLR RYDNCVRIKS  360
RMKKAVYDSQ FLAEFEERWS EMLEKYESLK QNKWLRKLYR EKDRCIPCFV KTTFWAGMST  420
TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-75	FAR1 family protein