PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026450270.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 421aa    MW: 46748.4 Da    PI: 6.621
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026450270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.3e-05175196223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                      C +C k F+r  nL+ H+r H
  XP_026450270.1 175 FCLICAKGFKRDANLRMHMRGH 196
                     59******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MDEDAAARKL PDWDPQAMLW NLSFLEHKIH QLRSMVHLIV QQQDCVSHRS NGLLAQQQQL  60
VSADLTSIIV QLISTAGSLL PSSKTSPSTA NVPRSVHVSE AVEQNNVIEH LEIGQAVNYV  120
LEQNDIGKSN LTAAAVEEHE FKEEEDVEEG HDLHPGSYEV LQLEKEEILA QHTHFCLICA  180
KGFKRDANLR MHMRGHGNQY KTPAALAKPA KDLSTEPVVL RRYSCPFVGC KRNKEHKKFL  240
PLKTILCVKN HYKRTHCEKS YICSRCNNKR FSVSADLKTH EKHCGRDNWL CSCGSTFSRK  300
DKLFGHVALF QGHTPVLPSD ETKGSVSDGG ESHELTTRAG STRFNFSSGA SSGIDIQNVL  360
GSRNGEDDPS SSYSQMDFEA CNFYGFPELP RIPSEVSEGS LSFLLSESSS VRNGGSLDDA  420
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.21e-139C2H2 family protein