PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450268.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 437aa MW: 48623.5 Da PI: 6.4292

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	191	212	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +C k F+r nL+ H+r H XP_026450268.1 191 FCLICAKGFKRDANLRMHMRGH 212 59******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MDFEDTPLGH QKCDKEMDED AAARKLPDWD PQAMLWNLSF LEHKIHQLRS MVHLIVQQQD 60 CVSHRSNGLL AQQQQLVSAD LTSIIVQLIS TAGSLLPSSK TSPSTANVPR SVHVSEAVEQ 120 NNVIEHLEIG QAVNYVLEQN DIGKSNLTAA AVEEHEFKEE EDVEEGHDLH PGSYEVLQLE 180 KEEILAQHTH FCLICAKGFK RDANLRMHMR GHGNQYKTPA ALAKPAKDLS TEPVVLRRYS 240 CPFVGCKRNK EHKKFLPLKT ILCVKNHYKR THCEKSYICS RCNNKRFSVS ADLKTHEKHC 300 GRDNWLCSCG STFSRKDKLF GHVALFQGHT PVLPSDETKG SVSDGGESHE LTTRAGSTRF 360 NFSSGASSGI DIQNVLGSRN GEDDPSSSYS QMDFEACNFY GFPELPRIPS EVSEGSLSFL 420 LSESSSVRNG GSLDDAL

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MDFEDTPLGH QKCDKEMDED AAARKLPDWD PQAMLWNLSF LEHKIHQLRS MVHLIVQQQD  60
CVSHRSNGLL AQQQQLVSAD LTSIIVQLIS TAGSLLPSSK TSPSTANVPR SVHVSEAVEQ  120
NNVIEHLEIG QAVNYVLEQN DIGKSNLTAA AVEEHEFKEE EDVEEGHDLH PGSYEVLQLE  180
KEEILAQHTH FCLICAKGFK RDANLRMHMR GHGNQYKTPA ALAKPAKDLS TEPVVLRRYS  240
CPFVGCKRNK EHKKFLPLKT ILCVKNHYKR THCEKSYICS RCNNKRFSVS ADLKTHEKHC  300
GRDNWLCSCG STFSRKDKLF GHVALFQGHT PVLPSDETKG SVSDGGESHE LTTRAGSTRF  360
NFSSGASSGI DIQNVLGSRN GEDDPSSSYS QMDFEACNFY GFPELPRIPS EVSEGSLSFL  420
LSESSSVRNG GSLDDAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-139	C2H2 family protein