PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026450262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26973.4 Da PI: 7.0488 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.1 | 4.3e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRrng++KKA+ELS+LCdaev +i+fsst+klye+ss XP_026450262.1 10 KIDNITSRQVTFSKRRNGLIKKAKELSILCDAEVGLIVFSSTDKLYEFSS 59 79**********************************************96 PP | |||||||
2 | K-box | 66.6 | 8.5e-23 | 76 | 168 | 8 | 97 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + +++++a+ +++e+a L+ + +nLq+ +++G++L sLs +eLq+Le+qLe sl+ + +K++ll+++i++l +k + l++en++L +k XP_026450262.1 76 NplmNASTEAKFWKREAATLRHQFQNLQEGYWQMMGQELCSLSANELQNLENQLELSLRGVHMQKDQLLTDEIRKLNQKRNLLRQENMELFNK 168 3456788999*******************************************************************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKIVIQK IDNITSRQVT FSKRRNGLIK KAKELSILCD AEVGLIVFSS TDKLYEFSST 60 SMNSLLERYD TSKEENPLMN ASTEAKFWKR EAATLRHQFQ NLQEGYWQMM GQELCSLSAN 120 ELQNLENQLE LSLRGVHMQK DQLLTDEIRK LNQKRNLLRQ ENMELFNKEH HTRQENLDLL 180 RKINEARDAN ETDRMSHSPN GFNLEEDIKV QLSQPQQQNC DTPRGEKATT LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 9e-74 | MIKC_MADS family protein |