PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449513.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 429aa MW: 49434.6 Da PI: 8.564

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.2	2.2e-26	135	222	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA++vGFs+rks+s+++ ++++ +r f+Cskeg +e+++ ++r +trt+Cka+l+++ ++dg + v++++leHnHel+p XP_026449513.1 135 DFYNRYARSVGFSIRKSSSTHR-SDKTVSRRIFCCSKEGVYREHSRG--APMKPRLQTRTDCKARLVIRIQDDGSYSVAEFVLEHNHELVP 222 6**************99987.7778**********999988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MSFIKLIQKR CKLCFQYLEG VIYLMVCLSI DTHFHIIIVM GGQCPRCLNG SRRIASLVRF 60 REKRKDRYYD KKFRNNAHKK VEQKMDKKST KSPIELNETF QTGGNILMET NIGVSKDIEV 120 PKLGMIFQSD DEAYDFYNRY ARSVGFSIRK SSSTHRSDKT VSRRIFCCSK EGVYREHSRG 180 APMKPRLQTR TDCKARLVIR IQDDGSYSVA EFVLEHNHEL VPPSEVHILR SHRKMREAQT 240 GMFNNLQLVG TGATGFYSYM SAEDGKTHNL SFTQVESSNH LDKRSKNILM TGDVQIMLDY 300 FNCMQKENPY FFYSIQMDGN NQICGCFWSD AKSRIDYSFF GDVVWVETTF RTSDYDKPCA 360 LFVGVNNHGQ AIPFGCALLW EETAESFVWL FQTFLEAMNG KPPESIFTDQ APQISDAVGR 420 VLPMFVAYL

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MSFIKLIQKR CKLCFQYLEG VIYLMVCLSI DTHFHIIIVM GGQCPRCLNG SRRIASLVRF  60
REKRKDRYYD KKFRNNAHKK VEQKMDKKST KSPIELNETF QTGGNILMET NIGVSKDIEV  120
PKLGMIFQSD DEAYDFYNRY ARSVGFSIRK SSSTHRSDKT VSRRIFCCSK EGVYREHSRG  180
APMKPRLQTR TDCKARLVIR IQDDGSYSVA EFVLEHNHEL VPPSEVHILR SHRKMREAQT  240
GMFNNLQLVG TGATGFYSYM SAEDGKTHNL SFTQVESSNH LDKRSKNILM TGDVQIMLDY  300
FNCMQKENPY FFYSIQMDGN NQICGCFWSD AKSRIDYSFF GDVVWVETTF RTSDYDKPCA  360
LFVGVNNHGQ AIPFGCALLW EETAESFVWL FQTFLEAMNG KPPESIFTDQ APQISDAVGR  420
VLPMFVAYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-73	FAR1 family protein