PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449511.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 513aa MW: 58543.4 Da PI: 7.8327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.7	2.9e-26	219	306	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA++vGFs+rks+s+++ ++++ +r f+Cskeg +e+++ ++r +trt+Cka+l+++ ++dg + v++++leHnHel+p XP_026449511.1 219 DFYNRYARSVGFSIRKSSSTHR-SDKTVSRRIFCCSKEGVYREHSRG--APMKPRLQTRTDCKARLVIRIQDDGSYSVAEFVLEHNHELVP 306 6**************99987.7778**********999988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MAKALVIDQN LTSTLQINEE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARRGGSRNNA 60 ATALKSKASE LTLSFEGKVY VFHKVNPEKI WINRCKLCFQ YLEGVIYLMV CLSIDTHFHI 120 IIVMGGQCPR CLNGSRRIAS LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL 180 NETFQTGGNI LMETNIGVSK DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR 240 SDKTVSRRIF CCSKEGVYRE HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH 300 NHELVPPSEV HILRSHRKMR EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVE 360 SSNHLDKRSK NILMTGDVQI MLDYFNCMQK ENPYFFYSIQ MDGNNQICGC FWSDAKSRID 420 YSFFGDVVWV ETTFRTSDYD KPCALFVGVN NHGQAIPFGC ALLWEETAES FVWLFQTFLE 480 AMNGKPPESI FTDQAPQISD AVGRVLPMFV AYL

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MAKALVIDQN LTSTLQINEE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARRGGSRNNA  60
ATALKSKASE LTLSFEGKVY VFHKVNPEKI WINRCKLCFQ YLEGVIYLMV CLSIDTHFHI  120
IIVMGGQCPR CLNGSRRIAS LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL  180
NETFQTGGNI LMETNIGVSK DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR  240
SDKTVSRRIF CCSKEGVYRE HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH  300
NHELVPPSEV HILRSHRKMR EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVE  360
SSNHLDKRSK NILMTGDVQI MLDYFNCMQK ENPYFFYSIQ MDGNNQICGC FWSDAKSRID  420
YSFFGDVVWV ETTFRTSDYD KPCALFVGVN NHGQAIPFGC ALLWEETAES FVWLFQTFLE  480
AMNGKPPESI FTDQAPQISD AVGRVLPMFV AYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-72	FAR1 family protein