PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448231.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 435aa MW: 47526.3 Da PI: 9.7617

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9e-05	200	222	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F ++ L+ H + H XP_026448231.1 200 TCHKCGEKFGKWEGLEAHHLSkH 222 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MKSFGKTQKE VVVEEEKKKK SPTVWFSLKK SLQCKSDPAD VFDPKTARNG NFNNNQNGGL 60 ASILTKRTSR SGCSRSIANL KDVIHGSKRH LEKPICSPRS IGSNELINPL AHEVILSDSK 120 CELKITGYNG GLHEGNGGGS GSGFVGTLTP GTPGPGGTYS FKTPTRKSST FYSDKEGFGG 180 SAPKSRTSLD IDSNGSSSVT CHKCGEKFGK WEGLEAHHLS KHAVTELVEG DSSRKIVEII 240 CQINSFKTEN NLTRIERVLK VHNMQKTLAR FEEYREMVKV KASKLPKKHP RCQADGNELL 300 RFYGTTLACS LGMNSSSNLC VSEKCNVCRI IRHGFSVKKE VKGGIGVFTT STSGRAFESV 360 ELSEEENSSL KKALIVCRVI AGRVHRPLEN FQERLAGQTG FDSLAGKMGP YSNIEELYLL 420 NPKALLPCFV VICKP

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MKSFGKTQKE VVVEEEKKKK SPTVWFSLKK SLQCKSDPAD VFDPKTARNG NFNNNQNGGL  60
ASILTKRTSR SGCSRSIANL KDVIHGSKRH LEKPICSPRS IGSNELINPL AHEVILSDSK  120
CELKITGYNG GLHEGNGGGS GSGFVGTLTP GTPGPGGTYS FKTPTRKSST FYSDKEGFGG  180
SAPKSRTSLD IDSNGSSSVT CHKCGEKFGK WEGLEAHHLS KHAVTELVEG DSSRKIVEII  240
CQINSFKTEN NLTRIERVLK VHNMQKTLAR FEEYREMVKV KASKLPKKHP RCQADGNELL  300
RFYGTTLACS LGMNSSSNLC VSEKCNVCRI IRHGFSVKKE VKGGIGVFTT STSGRAFESV  360
ELSEEENSSL KKALIVCRVI AGRVHRPLEN FQERLAGQTG FDSLAGKMGP YSNIEELYLL  420
NPKALLPCFV VICKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-157	C2H2 family protein