PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026447792.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 443aa MW: 50038.1 Da PI: 5.2386

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026447792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.1	4e-20	133	223	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y++Y++e GF +r+++++k +r +++t+ f+Cs+eg ++++ + + ++++ r++ rt+Cka++++ ++ ++ w+v+++ +HnH ++ XP_026447792.1 133 YQDYGRENGFIIRRRSTYKAQRGRRVTRVLFTCSCEGLHKKKCSVddEGRTKKVRSTMRTNCKAMMRIIWDRdSDDWVVNDFTDDHNHVMV 223 9**********************************988876654467778889999*****9988879************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MYSSLAKISA KKRFLASMTA VQNTETAMTE DETTAENIES GTPEDIENKA ADSTESKSDD 60 STEMTADENI ENTTSGNVEN RGNEDNGSRP VESIEKINEA EGHIVPFPSS GTKPKRPYVG 120 MIFSSIREAE VSYQDYGREN GFIIRRRSTY KAQRGRRVTR VLFTCSCEGL HKKKCSVDDE 180 GRTKKVRSTM RTNCKAMMRI IWDRDSDDWV VNDFTDDHNH VMVTPTKRVL MGSNKYMPHS 240 IMTKWMKDAN RDEADLPNDF LMHDRLVGTE AMRISHLCRR STQLAYLAGR SEDGYKVVMD 300 ILDQAFEKIK QLDTAVNEKA EKPSDIVIAD AVILPPISQE KGIKRVRKVK DKATEITSET 360 YQSRSGMEMS LGYKRPRVCK TCSGQGHDTR NCKSKEIDAI DEDVCRNEAD VDDVLLLPGG 420 EKYLSVQSEE LQEIDFAEEP ICN

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MYSSLAKISA KKRFLASMTA VQNTETAMTE DETTAENIES GTPEDIENKA ADSTESKSDD  60
STEMTADENI ENTTSGNVEN RGNEDNGSRP VESIEKINEA EGHIVPFPSS GTKPKRPYVG  120
MIFSSIREAE VSYQDYGREN GFIIRRRSTY KAQRGRRVTR VLFTCSCEGL HKKKCSVDDE  180
GRTKKVRSTM RTNCKAMMRI IWDRDSDDWV VNDFTDDHNH VMVTPTKRVL MGSNKYMPHS  240
IMTKWMKDAN RDEADLPNDF LMHDRLVGTE AMRISHLCRR STQLAYLAGR SEDGYKVVMD  300
ILDQAFEKIK QLDTAVNEKA EKPSDIVIAD AVILPPISQE KGIKRVRKVK DKATEITSET  360
YQSRSGMEMS LGYKRPRVCK TCSGQGHDTR NCKSKEIDAI DEDVCRNEAD VDDVLLLPGG  420
EKYLSVQSEE LQEIDFAEEP ICN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	9e-14	FAR1 family protein