PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447724.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 299aa    MW: 32400.6 Da    PI: 10.2917
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.53.5e-0810711768
        trihelix 17 meerlrrgklkkplWeevskkm..........rergferspkqCkekwenlnkrykkikege 68
                    + ++l+r+ l +++Weev++ +            +g  +s +qCk+k +n++kryk + +++
  XP_026447724.1 10 KFHKLNRSILHGKDWEEVAAIVtlhnksssggGGGGGAKSVEQCKNKVDNMKKRYKVELQRM 71
                    5678899999********************9999999*******************876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MTVKANELDK FHKLNRSILH GKDWEEVAAI VTLHNKSSSG GGGGGGAKSV EQCKNKVDNM  60
KKRYKVELQR MNTCGATNWI VDIAIFFYMK KLSLCVIGRF QVCSPSAGGG LSLTQLANPR  120
WKRVVFKVSG ASLVGAGPQK TDPKVLTVVT LLIAREVARA CSLGVEVDII LGGRNFFCGD  180
TWVTATGLER STYQLGMLAT VMNSVLLQYA PEALNVRTRV QTAFPVQQLT EPYNKRKAIR  240
HLEKGRVVIF GGVGAGTGNP LFATDTAAAL RASERRRVKE GIGTGAVDEH HWAVDLCGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.22e-82Trihelix family protein