PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447069.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 420aa    MW: 46805.6 Da    PI: 6.3059
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.11.7e-06174195223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                      C +Cgk F+r  nL+ H+r H
  XP_026447069.1 174 FCLICGKGFKRDANLRMHMRGH 195
                     5*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MDFEDTPLGH HQKCDKEMAM DAATKLPDWD PQAMLSNLSF LEHKIHQLQS MVHLIVEQED  60
CVSDRSNELV AQQQQLVSAD LTSIIVQLIS TAGSLLPSLR TSHSTANDTV EQKNVVNNGM  120
EQKYMANCNP AIAPIEEHEF KEEEDVVEGE HLPPGSYEVL QLEKEEILAP HTHFCLICGK  180
GFKRDANLRM HMRGHGDQYK TPAALAKPAK DLSMEPIVLR RYSCPFVGCK RNKEHKKFQP  240
LKTILCVKNH YKRTHCDKSH ICSICNNKRF SVMADLKTHE KHCGRDKWLC SCGTTFSRKD  300
KLFGHVALFQ GHTPVHASDE TKGSVSDGGE SNELTTKVGN TGFNFSSGTS GGNDIQNVLD  360
SKNSEEDPSS SYSPMNFDAC NFYGFSEFPR IPSEMSGGSL SFLLSESFSF RNGGSLDDAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.21e-147C2H2 family protein