PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446903.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 484aa MW: 55879.2 Da PI: 7.2548

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C +rk++L+rH+r++ XP_026446903.1 242 FFCEFCLNFMKRKEQLQRHMRKC 264 67*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MGSLETLTTT TSVENGTNAN CNGNQLQQQQ QQNHHGDGFD APTDVDKERE RLISSKNQNQ 60 ILNPHPQPQQ HQQPLTPDND GSLRRRRLGG AGGAGGSPLE VGSRVMCRWR DGKYHPVKVI 120 ERRRLPCGGP NDYEYYVHYT EFNRRLDEWV KVEQLDLNSV ETDVDEKVED KATSLKMTRH 180 QKRKIDETHV EGHEELDAAS LREHEEFTKV KNIATIELGR YEIETWYFSP FPPEYNDTLK 240 LFFCEFCLNF MKRKEQLQRH MRKCDLKHPP GDEIYRSGTL SMFEVDGKKN KVYGQNLCYL 300 AKLFLDHKTL YYDVDLFLFY VLCECDERGC HMVGYFSKEK HSEESYNLAC ILTLPPYQRK 360 GYGKFLIAFS YELSKKEGKV GTPERPLSDL GLLSYRGYWT RVLLDILKKH KSNISIKELS 420 DMTAIKADDI LTTLQGLDLI QYRKGQHAIC ADPKVLDRHL KAAGRGGLDV DVSKLIWTPY 480 KEQG

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MGSLETLTTT TSVENGTNAN CNGNQLQQQQ QQNHHGDGFD APTDVDKERE RLISSKNQNQ  60
ILNPHPQPQQ HQQPLTPDND GSLRRRRLGG AGGAGGSPLE VGSRVMCRWR DGKYHPVKVI  120
ERRRLPCGGP NDYEYYVHYT EFNRRLDEWV KVEQLDLNSV ETDVDEKVED KATSLKMTRH  180
QKRKIDETHV EGHEELDAAS LREHEEFTKV KNIATIELGR YEIETWYFSP FPPEYNDTLK  240
LFFCEFCLNF MKRKEQLQRH MRKCDLKHPP GDEIYRSGTL SMFEVDGKKN KVYGQNLCYL  300
AKLFLDHKTL YYDVDLFLFY VLCECDERGC HMVGYFSKEK HSEESYNLAC ILTLPPYQRK  360
GYGKFLIAFS YELSKKEGKV GTPERPLSDL GLLSYRGYWT RVLLDILKKH KSNISIKELS  420
DMTAIKADDI LTTLQGLDLI QYRKGQHAIC ADPKVLDRHL KAAGRGGLDV DVSKLIWTPY  480
KEQG