PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026446546.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 668aa    MW: 75743.3 Da    PI: 6.6439
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026446546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.34.7e-14125202285
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                     W k+evlaL+++r++m++ +++       W +vs+k++e g++rsp++Ckek e++n++   ++ +++  +s++    + f++l
  XP_026446546.1 125 WEKEEVLALLRIRSSMGHGFSDF-----IWGHVSRKLAELGYKRSPERCKEKYEEMNQYSNDTTPTANYSSSGKN-YNRSFSEL 202
                     ********************998.....9****************************998887777776544443.55566665 PP
2trihelix93.71.8e-29516605186
        trihelix   1 rWtkqevlaLiearremeerlrrg.....klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+++ev  Li++r ++++++++g     + k plWe++s+ m+e g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpyf+ql+
  XP_026446546.1 516 RWPRDEVYSLINLRCNLGNSSSNGgedkeNTKIPLWEKISQGMSELGYKRSAKKCKEKWENINKYFRKTKDTNKKR-SLDSKTCPYFHQLN 605
                     8*******************9975333336999******************************************8.999*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MFNGVPEQFH QFIASRTTTP LPLSHPLTLP LHVSPSPPPP TFSNFIDPQQ LSHQHLQQHQ  60
HHQLYQQQSH LLHQLHQQQQ QQSASTVQQV VVHHHQQQRQ DEEKEDEEQQ LRERVRSVSE  120
MGDPWEKEEV LALLRIRSSM GHGFSDFIWG HVSRKLAELG YKRSPERCKE KYEEMNQYSN  180
DTTPTANYSS SGKNYNRSFS ELEALFEDHH QNPKPTATNT SVVDNEDEKN NMVRSSNDNA  240
GGDDDSQGKI GLNMEENSGN ETLENPFVEN VVKKQTRSKK RKRHDHKLEL LKGLCEEIVN  300
KIMNQQEELH KKLLQDMERK EEERVSREEI WKKKEMDRVS KEIEMRAKEQ AIACDRETTI  360
IEFLKKFTSS ISSSSSQNNQ DDLSLKIENI IKTSSRNPTS SSSPSIILSS SSENPKSAIS  420
SVLVPTTQNT PKVPTSSSHV ATATNRTPSP THSNQKIPNL SHLDLVSENP NSIITTQNNN  480
QGDVTSSSTT TAAALTVSSQ EPGSTSNNDR EENGKRWPRD EVYSLINLRC NLGNSSSNGG  540
EDKENTKIPL WEKISQGMSE LGYKRSAKKC KEKWENINKY FRKTKDTNKK RSLDSKTCPY  600
FHQLNTLYNQ GRLTLPSDGP DNQSSAGNST ENHPESPERV VNGSKEEGAG DEKNNNSAQV  660
SAPLEFEY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1564572KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.16e-39Trihelix family protein