PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446426.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1251aa MW: 142712 Da PI: 7.2718

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.8	3e-07	400	464	25	88
FAR1 25 ngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 g+ fvC ++g + ++ + ++++r++r++++++C k++ + ++kw++ l HnHe XP_026446426.1 400 AGKGSFVLFVCDRSGVYRYTSCTpDTRKRQRRESKKCDCPFKVRGTCLPENKWRLRVLCGRHNHE 464 45556678******999998878889999999999999999999999*************8 PP
2	FAR1	23.3	2e-07	688	756	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++k +g+ f C+++g + ++ + + ++r++r+++++gC k++ + ++kw++ l HnHe XP_026446426.1 688 ETKPEGKGSFVLFACNRSGVYRYTSCTpDARKRQRRETKKCGCPFKVRGTCLPENKWRLRVLCGRHNHE 756 334566677889******99999886788889999999999999999*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1251 aa Download sequence
MKLRTHQLEK ESSLSNSSEH GGGSTEVSQL CRSEDDGLLN NPQKASDIKE VGFPISQKGI 60 DLTQSFETDQ VFDSRDAMFE WCQEVAKKKN TRLIIRKSQK KPAGKGSFIV VVCERSGVYQ 120 SHSNKIDTLG TEPQKRGSKK CGCPFTLRGA CLLENKWKLR VNCGRHNHEV ESNPVSFNRW 180 KQVEEQLLLD LTAKGAPPQQ VLQALKEKHK NNDVNLRTIY NKRSKLKQKE VESKSVMQQD 240 AGPVNHPHKD SNVMEENTPA LSVRIDVAQC FQTNAGPVNH PQKQSILMEE DTLISKAGID 300 MTQCFQNDQG KGLKNSNMME GDAPISKEGV EDEIPVSDPP KDGNMMEADS SISKKGMDVT 360 QFFQTDQLFD SRDAAFEWCQ EVADKNKTRV IIGKSETKPA GKGSFVLFVC DRSGVYRYTS 420 CTPDTRKRQR RESKKCDCPF KVRGTCLPEN KWRLRVLCGR HNHEAENTSV PLFNRDEEQL 480 GVKLTASGDR PQQVLEALKE KNKECLASTS GSAIYNTRSK LKLKEVARKS VAQEDAGSVN 540 HPHKDSNVME ENTPASNERI NVARCFQTDA GPVSHLQKES ILMEEDTLIS KGEGPVKDPL 600 NGSNMMEEDV PTSKEGMEIT HFYQTDQNKI SPEDVNMMED DAPIWREGMD VTQFFQTDQL 660 FDSRDAAFEW CQEVARENNT RIIIRKSETK PEGKGSFVLF ACNRSGVYRY TSCTPDARKR 720 QRRETKKCGC PFKVRGTCLP ENKWRLRVLC GRHNHEAENI PLPLFNRDVD QLVVKLTASG 780 ARPRQVVEAL KQKNKDCLVS AKDIYNRRSS LKRHVAEKMS VMEQVMKLST QYHYMVWYRK 840 DEETNELKDI VWAHPESTLL AKCFPSMLMI DCTYKTNRFK VPFFHVAGIS SLGTPFTVAY 900 AFIEEETKEH FSWALTQLKS LFFPHSLPSV CVMNGDHPLI NAVRSVFPEA KRLLCTLHIG 960 ECVVTNCRKA ISDDKEWDDF HRDWECVLKS ETKEDFADTY TEFVTTWVTR YPTCIKYIRD 1020 TWIVHKESFI LCWTRKIKHF GYKEVSTDES EHEQLRKHME SSTSTTGFFR CWEAMHSIVK 1080 DQINQISASN EKSLTYINRK HQIPAFGELK NHVSQHALDL ILLELEQLAV VESQKDIPQR 1140 ALKLRQPECN QSVDTSTGII SCWCLISYMH GLPCAHEVHN YIQDGRPIPL SAIDQQWKQL 1200 SVVLSLNDNL DFICLPEVQL LQERWMEASE SDRSLLQEQM KEVASSCDLA S

Sequence ? help Back to Top

Protein Sequence Length: 1251 aa Download sequence

MKLRTHQLEK ESSLSNSSEH GGGSTEVSQL CRSEDDGLLN NPQKASDIKE VGFPISQKGI  60
DLTQSFETDQ VFDSRDAMFE WCQEVAKKKN TRLIIRKSQK KPAGKGSFIV VVCERSGVYQ  120
SHSNKIDTLG TEPQKRGSKK CGCPFTLRGA CLLENKWKLR VNCGRHNHEV ESNPVSFNRW  180
KQVEEQLLLD LTAKGAPPQQ VLQALKEKHK NNDVNLRTIY NKRSKLKQKE VESKSVMQQD  240
AGPVNHPHKD SNVMEENTPA LSVRIDVAQC FQTNAGPVNH PQKQSILMEE DTLISKAGID  300
MTQCFQNDQG KGLKNSNMME GDAPISKEGV EDEIPVSDPP KDGNMMEADS SISKKGMDVT  360
QFFQTDQLFD SRDAAFEWCQ EVADKNKTRV IIGKSETKPA GKGSFVLFVC DRSGVYRYTS  420
CTPDTRKRQR RESKKCDCPF KVRGTCLPEN KWRLRVLCGR HNHEAENTSV PLFNRDEEQL  480
GVKLTASGDR PQQVLEALKE KNKECLASTS GSAIYNTRSK LKLKEVARKS VAQEDAGSVN  540
HPHKDSNVME ENTPASNERI NVARCFQTDA GPVSHLQKES ILMEEDTLIS KGEGPVKDPL  600
NGSNMMEEDV PTSKEGMEIT HFYQTDQNKI SPEDVNMMED DAPIWREGMD VTQFFQTDQL  660
FDSRDAAFEW CQEVARENNT RIIIRKSETK PEGKGSFVLF ACNRSGVYRY TSCTPDARKR  720
QRRETKKCGC PFKVRGTCLP ENKWRLRVLC GRHNHEAENI PLPLFNRDVD QLVVKLTASG  780
ARPRQVVEAL KQKNKDCLVS AKDIYNRRSS LKRHVAEKMS VMEQVMKLST QYHYMVWYRK  840
DEETNELKDI VWAHPESTLL AKCFPSMLMI DCTYKTNRFK VPFFHVAGIS SLGTPFTVAY  900
AFIEEETKEH FSWALTQLKS LFFPHSLPSV CVMNGDHPLI NAVRSVFPEA KRLLCTLHIG  960
ECVVTNCRKA ISDDKEWDDF HRDWECVLKS ETKEDFADTY TEFVTTWVTR YPTCIKYIRD  1020
TWIVHKESFI LCWTRKIKHF GYKEVSTDES EHEQLRKHME SSTSTTGFFR CWEAMHSIVK  1080
DQINQISASN EKSLTYINRK HQIPAFGELK NHVSQHALDL ILLELEQLAV VESQKDIPQR  1140
ALKLRQPECN QSVDTSTGII SCWCLISYMH GLPCAHEVHN YIQDGRPIPL SAIDQQWKQL  1200
SVVLSLNDNL DFICLPEVQL LQERWMEASE SDRSLLQEQM KEVASSCDLA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-18	FAR1 family protein