PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026446121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 424aa MW: 45796.4 Da PI: 6.7579 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0013 | 167 | 188 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C+k F ++ + H+rtH XP_026446121.1 167 SCYECKKEFFSWKAVHGHMRTH 188 599******************9 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 329 | 351 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C ++F + L H+r+H XP_026446121.1 329 FGCHICLRRFASGQALGGHMRRH 351 56********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MDRRENNENQ SHPLLTSSPD QEHAESTNLD NEESMSRSQD HAEDGVLVIS QGNGDVGSPR 60 RSTPGPVEPN SSRPNVNVED GVGQSATAIP EGDVAVGLPR CFVQGESSAP IPRNVADIDP 120 SSLVFHPGLS TKSGKKTRKN KKVQGIRIGM KEGQPSNPFL DLNRFPSCYE CKKEFFSWKA 180 VHGHMRTHPE REWRGTVPPP NVARPSFPVA ADENRESPAP ATNQEVEVAT GLLLLSFTNS 240 RGVLVSSANN SQDQEPQRSR QVTENSASSS NARYECSVYK KVFLTHQGLG GHRASHKNVK 300 GCHAMDNTAA EHHSAERNGG ETSGTGNIFG CHICLRRFAS GQALGGHMRR HPQRREEASS 360 SAQDPNVDPT SLARIGLVVD LNLPLPPNIP PPPYLRIEND EGSSASSSSS SSSPSPDTSL 420 DLHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35280.1 | 1e-41 | C2H2 family protein |