PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445742.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1163aa MW: 132596 Da PI: 6.6134

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.3	6e-24	162	249	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++Y++YAke GFs+rks+ ++s+ +++ ++r++vC k+g r+ ++k+ + k r+r +tr++C+a + +k++ +gkw+v+++++eHnH+ XP_026445742.1 162 EYYKAYAKENGFSIRKSHVERSRVDHSLISRKYVCVKQGVRSLKDKRyEGKVVRHRRVTRVDCRAAMIIKRR-SGKWVVHRFHKEHNHD 249 69**************************************999986778889**************.*************7 PP
2	FAR1	79.8	4.9e-25	405	494	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAke GFs+rks+ ++s+ ++++++r +vC ++g r++++k+ + k r+r+etr +C+a++ +k++ +gkw+v+k+ +HnH+l+ XP_026445742.1 405 EFYNAYAKEKGFSIRKSRIERSRVDHSMISRLYVCANQGLRSTKDKRyEGKVVRPRQETRLDCRACMFIKRR-SGKWVVDKFLDDHNHDLV 494 6**************************************9999986778899**************.**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MQNSSGSPRS PTYASFYAPS SSSSSPPWSP FQITSSISHS VTNVGSVQTL EMEGALPNEF 60 THLGSTNDPP MNQTWQQIEH SQRCIDMEDT INLGQEILEA EEVEYDENIQ EPPPTIDGQE 120 YAKKDVDSTE SSGREDGNVF LIKLGSEPYI GLEFCSEGEA YEYYKAYAKE NGFSIRKSHV 180 ERSRVDHSLI SRKYVCVKQG VRSLKDKRYE GKVVRHRRVT RVDCRAAMII KRRSGKWVVH 240 RFHKEHNHDR DPSKACGHKE QNHDLDPSKA CGHKEQNHDL DPSKDCELQP HRNMANSTKS 300 ILEALYKTQC IDMEDGMTLG QKVLNPDAAV PDTTIQAPQS IADLQEDVNE GGISGREANN 360 GEESPSGEIN AGESSGKEDN KSSLFKLGSE PFIGLQFASQ DEAYEFYNAY AKEKGFSIRK 420 SRIERSRVDH SMISRLYVCA NQGLRSTKDK RYEGKVVRPR QETRLDCRAC MFIKRRSGKW 480 VVDKFLDDHN HDLVDPAKAD KLRSHKKMTN TTKSMVEALY KCGIGPAKII DLLTEVADGA 540 KSILESNEQE EYENEMKKER KNNIRVECYR LLESFQELQA SDPGFFYAVE FGENRSMRSI 600 FWADSQAREA YKKFGDVLVF DSICRTNKYL YPFVAFTGVN HHRQPVLFGC GFLADETVET 660 FTWFLNTWLR AMSNHQPTSM ITNQDKAVKV AVEKVFPETR HRFCKWYIEK DETENLGHIF 720 NMHPAFQAEY NKCIYSSRAP KDFELGWEVL LLKYNLKDNK WLNRLYNHRH HWVPLYLQDT 780 FFGGMTTTHK CEGMIAYFNG FLNGGTPFSE FLSQYQGAIK QRHEEEVNED FLTVCTRAVL 840 TSKNPVEEQA SRVYTRNMFA AFENEFVESS GCTARKIAEE ESICTYLVGK YKDKDDRMNI 900 VTFAPTDKRA SCSCQMFEFE GMLCRHVLKV FQVVNVFEIP PNYILKRWTM SSSYYVGPWS 960 NDEVGAGSRD QCGNSVWDLR AATRSFIEIG ETSENRVNVA INILQEGIRK LDLISVPAVA 1020 SIPPHDNLGS NSVHQGENTD EQTDGIWMMD LNISVPDPPR VKQKGRPISS RMKLGIEQVQ 1080 KKKRTCGTCK ETGHYTRTCP KGVVHHHTQN PTMLTDPFDH PQSSTIFQDH SQAPVMLQGP 1140 MDESQNSIML QGPYGQSQIF AML

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MQNSSGSPRS PTYASFYAPS SSSSSPPWSP FQITSSISHS VTNVGSVQTL EMEGALPNEF  60
THLGSTNDPP MNQTWQQIEH SQRCIDMEDT INLGQEILEA EEVEYDENIQ EPPPTIDGQE  120
YAKKDVDSTE SSGREDGNVF LIKLGSEPYI GLEFCSEGEA YEYYKAYAKE NGFSIRKSHV  180
ERSRVDHSLI SRKYVCVKQG VRSLKDKRYE GKVVRHRRVT RVDCRAAMII KRRSGKWVVH  240
RFHKEHNHDR DPSKACGHKE QNHDLDPSKA CGHKEQNHDL DPSKDCELQP HRNMANSTKS  300
ILEALYKTQC IDMEDGMTLG QKVLNPDAAV PDTTIQAPQS IADLQEDVNE GGISGREANN  360
GEESPSGEIN AGESSGKEDN KSSLFKLGSE PFIGLQFASQ DEAYEFYNAY AKEKGFSIRK  420
SRIERSRVDH SMISRLYVCA NQGLRSTKDK RYEGKVVRPR QETRLDCRAC MFIKRRSGKW  480
VVDKFLDDHN HDLVDPAKAD KLRSHKKMTN TTKSMVEALY KCGIGPAKII DLLTEVADGA  540
KSILESNEQE EYENEMKKER KNNIRVECYR LLESFQELQA SDPGFFYAVE FGENRSMRSI  600
FWADSQAREA YKKFGDVLVF DSICRTNKYL YPFVAFTGVN HHRQPVLFGC GFLADETVET  660
FTWFLNTWLR AMSNHQPTSM ITNQDKAVKV AVEKVFPETR HRFCKWYIEK DETENLGHIF  720
NMHPAFQAEY NKCIYSSRAP KDFELGWEVL LLKYNLKDNK WLNRLYNHRH HWVPLYLQDT  780
FFGGMTTTHK CEGMIAYFNG FLNGGTPFSE FLSQYQGAIK QRHEEEVNED FLTVCTRAVL  840
TSKNPVEEQA SRVYTRNMFA AFENEFVESS GCTARKIAEE ESICTYLVGK YKDKDDRMNI  900
VTFAPTDKRA SCSCQMFEFE GMLCRHVLKV FQVVNVFEIP PNYILKRWTM SSSYYVGPWS  960
NDEVGAGSRD QCGNSVWDLR AATRSFIEIG ETSENRVNVA INILQEGIRK LDLISVPAVA  1020
SIPPHDNLGS NSVHQGENTD EQTDGIWMMD LNISVPDPPR VKQKGRPISS RMKLGIEQVQ  1080
KKKRTCGTCK ETGHYTRTCP KGVVHHHTQN PTMLTDPFDH PQSSTIFQDH SQAPVMLQGP  1140
MDESQNSIML QGPYGQSQIF AML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-161	FAR1 family protein