PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026445475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 627aa MW: 70033.8 Da PI: 6.4681 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.3 | 1.5e-27 | 187 | 240 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ LH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_026445475.1 187 KARVVWSIGLHQQFVSAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 240 68*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 35 | 3.3e-11 | 189 | 239 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ +++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_026445475.1 189 RVVWSIGLHQQFVSAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 239 6689999*******************************************7 PP | |||||||
3 | Response_reg | 75.3 | 2.3e-25 | 12 | 120 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l+ y ev++ +++ +al ll+e++ +Dl+l D+ mp+mdG++ll+ i e +lp+i++++ +++e + + + G XP_026445475.1 12 VLVVDDDLTCLKVLKRMLQMCLY-EVTTYSQAVAALSLLRERKymFDLVLSDVHMPDMDGFKLLELIGLEM-DLPVIMMSMDDKKEVVMKGVTHG 104 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +e++ + XP_026445475.1 105 ACDYLVKPIRMEAIKN 120 ***********99976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 627 aa Download sequence |
MDKGGFPAGL RVLVVDDDLT CLKVLKRMLQ MCLYEVTTYS QAVAALSLLR ERKYMFDLVL 60 SDVHMPDMDG FKLLELIGLE MDLPVIMMSM DDKKEVVMKG VTHGACDYLV KPIRMEAIKN 120 IWQHVIRKRR HELKELEQTT SVEDTERLQN PTEDADNASS ANEESYKNKR KDEEDDDDKD 180 NNSTVKKARV VWSIGLHQQF VSAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL 240 YLKRVSGGTQ NGFRPRFGGS PSSIYGSLPS LNEFNLQTFT VPGQLPLQNF ASRQAGIIRS 300 ARHGSLNMHI TSQRNMFSGE LARPRFGVGH QVNNNAQGTL LPGLPSSVGQ TPPLTNLHQQ 360 PLRSSWNTGL QSNGSSTRFV DHVTGFHGTG FPTQFGLFRN NDSSVMMQMP QSQLKGQLIS 420 NDVSRQFPSG NEIPINGRGT TPNQISPASP LVNFPMNRTP ELTGHGYPLG NFTRVSCLQQ 480 VGTFGNEGSS ETKRLPGFNP SYDIIADLRQ NIVEGSDFHD GVLNCETSQN SSTGQSLQVL 540 GHQGFLSNQI NDNREEQQHE VPKNPQENEN FDAKVEYMPE LGTKFFDLSR NWSQDDLMSE 600 LFKQQDGVGM INTGHNFDSF PLDNISV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16857.2 | 1e-122 | ARR-B family protein |