PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026445038.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 375aa    MW: 44012.1 Da    PI: 8.8629
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026445038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1652e-2041122388
            FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     Y++YAk+ GF vrk++++++ ++g i +  +vC++ g++ +++k+     ++r+++ ++Cka ++ ++++++kwe+++l+l+HnH+
  XP_026445038.1  41 YKSYAKREGFAVRKRTNRRN-EEGIIRSVMYVCNRAGNPVNKTKN---IAKHRKSNCCDCKAYVTARLDDEDKWEISQLKLDHNHT 122
                     9***************9998.8888***************99988...8999999******************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MAVVSLDDTE KKAGEKTQNT DEDEWYIGKK FETHDDLFRA YKSYAKREGF AVRKRTNRRN  60
EEGIIRSVMY VCNRAGNPVN KTKNIAKHRK SNCCDCKAYV TARLDDEDKW EISQLKLDHN  120
HTYDPSLSRH YRQHRKVEPH VLRTIDLNDQ SGIPMEKTFR SVVNQYGGYD KVDCSEKDCR  180
NALAEIRRLL GEGDATALMK YFSKKVKANN GFYFEVDYDD ENQLRNVFWA DGWSREAYKE  240
FGEVISFDAT YMTNDYEMPF PPFVGVNHHG QSILLGCGLL CNETTETFVW LFKKWLKCMS  300
GCAPRAIITD QCQAMKNAVE IVFPEARHRW CLWHIMKKIP ENFGSYKQRE KLRLLCKRQY  360
MIPRLQLSLK NHGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-67FAR1 family protein