PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444226.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 332aa MW: 37162.9 Da PI: 9.2092

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.6	6.6e-13	49	147	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm............rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 +W+++ +L+ea e+ +l+rg+l++++W+ v++ + ++ ++rs +qCk++++ l+k+yk +k++ + + + +s++p++d XP_026444226.1 49 CWSEEASCTLVEAWGERYLELNRGNLRQQHWQLVADTVnnrhannnnhnhNKKFLRRSDVQCKNRIDTLKKKYKLEKARVLSSHGTYKSNWPLYD 143 7**********************************************66666799****************998888888889** PP trihelix 84 qlea 87 ql+a XP_026444226.1 144 QLDA 147 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MKGEPEETLT SPPPLNFTPP GLSLAPPTSA VTPETPASTR TGLPIREDCW SEEASCTLVE 60 AWGERYLELN RGNLRQQHWQ LVADTVNNRH ANNNNHNHNK KFLRRSDVQC KNRIDTLKKK 120 YKLEKARVLS SHGTYKSNWP LYDQLDALIG NTVQSKKMMV ASESQSSPMG LPYYQQHRKT 180 PPQLPAMFVH PVTLRDKQKR SSPPPAGYVP PAVSRGIDES FFRRNYSAVA AAAAAVDDVG 240 GNSDSSRSSG ESDRGGQVDG FGELAKAISA FADIYEKVEG ARQRQMMELE KERMEFMKSL 300 EYQRMQLFMD SQVQMEKIKR TKLDAAATAS DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	3e-51	Trihelix family protein