PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444217.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 510aa MW: 58741.5 Da PI: 6.9501

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.5	2e-30	131	184	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++F+++ve++GG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_026444217.1 131 PRLRWTSDLHHSFIHCVERIGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 184 8****************************************************7 PP
2	Myb_DNA-binding	42.7	1.3e-13	132	183	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++++v++ Gg t+k++ + m+ kg++ ++ks++q+y+ XP_026444217.1 132 RLRWTSDLHHSFIHCVERIGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 183 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MVTDQQRQEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM 60 MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT 120 TVRQYVRSKM PRLRWTSDLH HSFIHCVERI GGQERATPKL VLQLMNVKGL SIAHVKSHLQ 180 MYRSKKLDEC GQVLSQTNMQ GGHDQMYYHH HRTSHPQQQP FRIDNYKNFV QAQNMHDTSP 240 NHLQYPLSQQ QQFDHRDSCY PRHQEWGFSQ NNHRMKPIPV QAADKGIGIE QASHGMKISS 300 HLFDLRNAIS WNGPIRPNRF LEEKKWPPRQ MMTSVNTMSS LSLELNNDNN TDKRFRSDSN 360 YHRISSNSFQ HPQFGLDKLT TVLAKERRDE MVENIDIMSS SCMGDKREQE SMPNLQLSLS 420 QNLRNSDDFF NNNNSSSSSS KLESCTTTRT KDQINSALRL SLFPTNEETN EQQQQQRQHT 480 DRNSSTSNLW CLQRNSCSNS NNNQQASVRG

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MVTDQQRQEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM  60
MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT  120
TVRQYVRSKM PRLRWTSDLH HSFIHCVERI GGQERATPKL VLQLMNVKGL SIAHVKSHLQ  180
MYRSKKLDEC GQVLSQTNMQ GGHDQMYYHH HRTSHPQQQP FRIDNYKNFV QAQNMHDTSP  240
NHLQYPLSQQ QQFDHRDSCY PRHQEWGFSQ NNHRMKPIPV QAADKGIGIE QASHGMKISS  300
HLFDLRNAIS WNGPIRPNRF LEEKKWPPRQ MMTSVNTMSS LSLELNNDNN TDKRFRSDSN  360
YHRISSNSFQ HPQFGLDKLT TVLAKERRDE MVENIDIMSS SCMGDKREQE SMPNLQLSLS  420
QNLRNSDDFF NNNNSSSSSS KLESCTTTRT KDQINSALRL SLFPTNEETN EQQQQQRQHT  480
DRNSSTSNLW CLQRNSCSNS NNNQQASVRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	47	RRGKKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-33	G2-like family protein