PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026443839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 240aa MW: 28335.2 Da PI: 9.5331 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 58.4 | 2.4e-18 | 11 | 103 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y eY+ + F vr+++++k+ +++t+++fvCs+egkr+++ + + ++ + ++ +++Cka+++v ++ gkw+vtk+ HnH+++ XP_026443839.1 11 DYYTEYGVHERFGVRIRSTNKTrAGYDQVTSAHFVCSREGKRKKDIVDrIDPKSISCSTVQCECKAEMRVLYSTnLGKWRVTKFLDVHNHKFV 103 59***************99999344678****************9888456777789999**********999989**************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MIFNSYEEAY DYYTEYGVHE RFGVRIRSTN KTRAGYDQVT SAHFVCSREG KRKKDIVDRI 60 DPKSISCSTV QCECKAEMRV LYSTNLGKWR VTKFLDVHNH KFVSPLKRIQ LRLNRDMPDA 120 AKNLTEVFNR ENIRIAKVPS VFGGSIIGFD KRNCYNHLRT IRRYELEVGD TQSVLNFFQR 180 KQRENPQFFY SVQVDEEGRA VNFFWVDARS CMAYEHFGDV VTFDTTYRTK KYQMPLAPFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-37 | FAR1 family protein |