PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443713.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 384aa    MW: 44104.8 Da    PI: 9.0311
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.74.4e-14601173290
            FAR1  32 tfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +f+    g r+++ k  e+++r++a  rt+Cka +++kk+ +++w+v+ +++eHnH+l+
  XP_026443713.1  60 DFYNRFAGLRDRRAKPVEQRKRQQADVRTDCKAVMMIKKR-NDRWVVSGVVEEHNHKLV 117
                     566666788999999999**********************.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MNPCRNLLSE FDCSEDVTDN NRDLSPGKNA NGAKEPSEEE LKVVRPYVGK EFESQDEAYD  60
FYNRFAGLRD RRAKPVEQRK RQQADVRTDC KAVMMIKKRN DRWVVSGVVE EHNHKLVSPS  120
KRNNLRSLRK INSSQKQQIV NFRLAGVKTN QLINYLEVEN GGVKNIGFLP KDARNYLSTR  180
RQLELKHGDA QAVLDYFERQ QMENPSFFYK IQVDSEGQMT NSFWAYAKSR IDYYYFGDIV  240
CFEPTYSTNR YDMPFVSIVG INHHHQIVLF GGALLYSESE DSLEWVMKTW MRAMHGKTPK  300
VILTDQESAI GGAIASVLPG KSKDSFREIN SQPESLHEFP FSCPHSPHSP TSSCSKWKHQ  360
RATNKHVSKL GAKIIMYGHE AMSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-63FAR1 family protein