PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443712.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 416aa MW: 47778.9 Da PI: 9.2133

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.7	6e-26	60	149	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn++A ++GFs+r ++++ks+ + e++ rtf+Cs +g r+++ k e+++r++a rt+Cka +++kk+ +++w+v+ +++eHnH+l+ XP_026443712.1 60 DFYNRFAGKTGFSIRWHSTNKSRVDpFEVIGRTFCCSFQGLRDRRAKPVEQRKRQQADVRTDCKAVMMIKKR-NDRWVVSGVVEEHNHKLV 149 6******************9766258****************************************.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MNPCRNLLSE FDCSEDVTDN NRDLSPGKNA NGAKEPSEEE LKVVRPYVGK EFESQDEAYD 60 FYNRFAGKTG FSIRWHSTNK SRVDPFEVIG RTFCCSFQGL RDRRAKPVEQ RKRQQADVRT 120 DCKAVMMIKK RNDRWVVSGV VEEHNHKLVS PSKRNNLRSL RKINSSQKQQ IVNFRLAGVK 180 TNQLINYLEV ENGGVKNIGF LPKDARNYLS TRRQLELKHG DAQAVLDYFE RQQMENPSFF 240 YKIQVDSEGQ MTNSFWAYAK SRIDYYYFGD IVCFEPTYST NRYDMPFVSI VGINHHHQIV 300 LFGGALLYSE SEDSLEWVMK TWMRAMHGKT PKVILTDQES AIGGAIASVL PGKSKDSFRE 360 INSQPESLHE FPFSCPHSPH SPTSSCSKWK HQRATNKHVS KLGAKIIMYG HEAMSS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MNPCRNLLSE FDCSEDVTDN NRDLSPGKNA NGAKEPSEEE LKVVRPYVGK EFESQDEAYD  60
FYNRFAGKTG FSIRWHSTNK SRVDPFEVIG RTFCCSFQGL RDRRAKPVEQ RKRQQADVRT  120
DCKAVMMIKK RNDRWVVSGV VEEHNHKLVS PSKRNNLRSL RKINSSQKQQ IVNFRLAGVK  180
TNQLINYLEV ENGGVKNIGF LPKDARNYLS TRRQLELKHG DAQAVLDYFE RQQMENPSFF  240
YKIQVDSEGQ MTNSFWAYAK SRIDYYYFGD IVCFEPTYST NRYDMPFVSI VGINHHHQIV  300
LFGGALLYSE SEDSLEWVMK TWMRAMHGKT PKVILTDQES AIGGAIASVL PGKSKDSFRE  360
INSQPESLHE FPFSCPHSPH SPTSSCSKWK HQRATNKHVS KLGAKIIMYG HEAMSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-70	FAR1 family protein