PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 416aa MW: 47733.9 Da PI: 7.7537 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.7 | 6e-26 | 94 | 183 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn++A ++GFs+r ++++ks+ + e++ rtf+Cs +g r+++ k e+++r++a rt+Cka +++kk+ +++w+v+ +++eHnH+l+ XP_026443711.1 94 DFYNRFAGKTGFSIRWHSTNKSRVDpFEVIGRTFCCSFQGLRDRRAKPVEQRKRQQADVRTDCKAVMMIKKR-NDRWVVSGVVEEHNHKLV 183 6********************9766258********************************************.9***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence |
MNPCRNLLSE FDCSEDVTDN NRDLSPGKND EIQISSEETF TDMKDIENIN SLDGEELNGE 60 VIAANGAKEP SEEELKVVRP YVGKEFESQD EAYDFYNRFA GKTGFSIRWH STNKSRVDPF 120 EVIGRTFCCS FQGLRDRRAK PVEQRKRQQA DVRTDCKAVM MIKKRNDRWV VSGVVEEHNH 180 KLVSPSKRNN LRSLRKINSS QKQQIVNFRL AGVKTNQLIN YLEVENGGVK NIGFLPKDAR 240 NYLSTRRQLE LKHGDAQAVL DYFERQQMEN PSFFYKIQVD SEGQMTNSFW AYAKSRIDYY 300 YFGDIVCFEP TYSTNRYDMP FVSIVGINHH HQIVLFGGAL LYSESEDSLE WVMKTWMRAM 360 HGKTPKVILT DQESAIGGAI ASVLPAIAYM GKRQLNNLSM VGQRCLRITN CRTISG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-70 | FAR1 family protein |