PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443710.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 418aa    MW: 47885.8 Da    PI: 6.9935
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.45.3e-14941513290
            FAR1  32 tfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +f+    g r+++ k  e+++r++a  rt+Cka +++kk+ +++w+v+ +++eHnH+l+
  XP_026443710.1  94 DFYNRFAGLRDRRAKPVEQRKRQQADVRTDCKAVMMIKKR-NDRWVVSGVVEEHNHKLV 151
                     555566788999999999**********************.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MNPCRNLLSE FDCSEDVTDN NRDLSPGKND EIQISSEETF TDMKDIENIN SLDGEELNGE  60
VIAANGAKEP SEEELKVVRP YVGKEFESQD EAYDFYNRFA GLRDRRAKPV EQRKRQQADV  120
RTDCKAVMMI KKRNDRWVVS GVVEEHNHKL VSPSKRNNLR SLRKINSSQK QQIVNFRLAG  180
VKTNQLINYL EVENGGVKNI GFLPKDARNY LSTRRQLELK HGDAQAVLDY FERQQMENPS  240
FFYKIQVDSE GQMTNSFWAY AKSRIDYYYF GDIVCFEPTY STNRYDMPFV SIVGINHHHQ  300
IVLFGGALLY SESEDSLEWV MKTWMRAMHG KTPKVILTDQ ESAIGGAIAS VLPGKSKDSF  360
REINSQPESL HEFPFSCPHS PHSPTSSCSK WKHQRATNKH VSKLGAKIIM YGHEAMSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-63FAR1 family protein