PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443531.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

E2F/DP

Protein Properties

Length: 409aa MW: 46121.2 Da PI: 9.3049

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73	3.3e-23	39	104	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ e + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn++ w+g XP_026443531.1 39 RKQKSLGLLCTNFLGLYNRPEVRFIGLDDAANRL---GV--ERRRIYDIVNVLESIGVLTRKAKNQYAWIG 104 79**************9999********.....****************************98 PP
2	E2F_TDP	78.3	7.2e-25	187	267	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+f+kl+ + +++ v+l+e+ak L+ + + ++k+RR+YDi+NVL+++nliek ++k+++rw g XP_026443531.1 187 RREKSLGLLTQNFVKLFICRNNDLVSLDEAAKILLGDihnssHLRTKVRRLYDIANVLSSMNLIEKthhaeSRKPAFRWLG 267 689*************************************99******************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MYFAVSEKKE EIQMEGLHDQ IPSLSSLLYH DSKHHSYSRK QKSLGLLCTN FLGLYNRPEV 60 RFIGLDDAAN RLGVERRRIY DIVNVLESIG VLTRKAKNQY AWIGFAGIPK ALEELKEEAS 120 KETSLNVFES KKFVKSQVSE SEQDENISNA TMSNSTTSIK QDNTCPSFPG SSTSKPDGSS 180 AGSADNRREK SLGLLTQNFV KLFICRNNDL VSLDEAAKIL LGDIHNSSHL RTKVRRLYDI 240 ANVLSSMNLI EKTHHAESRK PAFRWLGLSG KIPTESLASL DTKKRVFGTE ITNLDVKRAK 300 MVSMADRKQY ENTSVQVKCE ALTDPLHQDQ QAKQSSKSVV FGPFSPAGLP KVDPEKKSLR 360 SVQDWENLAA SYRPRYHNQA LSDLFAHYME AWKTWYVEIA GTHPLQQFS

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MYFAVSEKKE EIQMEGLHDQ IPSLSSLLYH DSKHHSYSRK QKSLGLLCTN FLGLYNRPEV  60
RFIGLDDAAN RLGVERRRIY DIVNVLESIG VLTRKAKNQY AWIGFAGIPK ALEELKEEAS  120
KETSLNVFES KKFVKSQVSE SEQDENISNA TMSNSTTSIK QDNTCPSFPG SSTSKPDGSS  180
AGSADNRREK SLGLLTQNFV KLFICRNNDL VSLDEAAKIL LGDIHNSSHL RTKVRRLYDI  240
ANVLSSMNLI EKTHHAESRK PAFRWLGLSG KIPTESLASL DTKKRVFGTE ITNLDVKRAK  300
MVSMADRKQY ENTSVQVKCE ALTDPLHQDQ QAKQSSKSVV FGPFSPAGLP KVDPEKKSLR  360
SVQDWENLAA SYRPRYHNQA LSDLFAHYME AWKTWYVEIA GTHPLQQFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-117	E2F/DP family protein