PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443530.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

E2F/DP

Protein Properties

Length: 413aa MW: 46477.5 Da PI: 9.3049

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	72.9	3.4e-23	39	104	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ e + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn++ w+g XP_026443530.1 39 RKQKSLGLLCTNFLGLYNRPEVRFIGLDDAANRL---GV--ERRRIYDIVNVLESIGVLTRKAKNQYAWIG 104 79**************9999********.....****************************98 PP
2	E2F_TDP	74.9	8.4e-24	187	271	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+f+kl+ + +++ v+l+e+ak L+ + + k+RR+YDi+NVL+++nliek ++k+++rw g XP_026443530.1 187 RREKSLGLLTQNFVKLFICRNNDLVSLDEAAKILLGDihnsshlrnNSAAKVRRLYDIANVLSSMNLIEKthhaeSRKPAFRWLG 271 689****************************************977789***************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MYFAVSEKKE EIQMEGLHDQ IPSLSSLLYH DSKHHSYSRK QKSLGLLCTN FLGLYNRPEV 60 RFIGLDDAAN RLGVERRRIY DIVNVLESIG VLTRKAKNQY AWIGFAGIPK ALEELKEEAS 120 KETSLNVFES KKFVKSQVSE SEQDENISNA TMSNSTTSIK QDNTCPSFPG SSTSKPDGSS 180 AGSADNRREK SLGLLTQNFV KLFICRNNDL VSLDEAAKIL LGDIHNSSHL RNNSAAKVRR 240 LYDIANVLSS MNLIEKTHHA ESRKPAFRWL GLSGKIPTES LASLDTKKRV FGTEITNLDV 300 KRAKMVSMAD RKQYENTSVQ VKCEALTDPL HQDQQAKQSS KSVVFGPFSP AGLPKVDPEK 360 KSLRSVQDWE NLAASYRPRY HNQALSDLFA HYMEAWKTWY VEIAGTHPLQ QFS

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MYFAVSEKKE EIQMEGLHDQ IPSLSSLLYH DSKHHSYSRK QKSLGLLCTN FLGLYNRPEV  60
RFIGLDDAAN RLGVERRRIY DIVNVLESIG VLTRKAKNQY AWIGFAGIPK ALEELKEEAS  120
KETSLNVFES KKFVKSQVSE SEQDENISNA TMSNSTTSIK QDNTCPSFPG SSTSKPDGSS  180
AGSADNRREK SLGLLTQNFV KLFICRNNDL VSLDEAAKIL LGDIHNSSHL RNNSAAKVRR  240
LYDIANVLSS MNLIEKTHHA ESRKPAFRWL GLSGKIPTES LASLDTKKRV FGTEITNLDV  300
KRAKMVSMAD RKQYENTSVQ VKCEALTDPL HQDQQAKQSS KSVVFGPFSP AGLPKVDPEK  360
KSLRSVQDWE NLAASYRPRY HNQALSDLFA HYMEAWKTWY VEIAGTHPLQ QFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-114	E2F/DP family protein