PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 203aa MW: 22315.2 Da PI: 9.3688 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00079 | 39 | 61 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C++ F++ L H +H XP_026443502.1 39 YKCKTCNRQFPSFQALGGHRASH 61 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MMGNKRSGGE MEDISIGEVD PRPVVQKQET SMSSRSRVYK CKTCNRQFPS FQALGGHRAS 60 HKKPRLVNQI SSDSPSSQQQ MRKPKTHACS ICGLEFAVGQ ALGGHMRKHR ATLIDTSPTT 120 EAAAATTTEL SSSSSDITNS TTHEKQPLIP EVRKSNNRIL SLDLDLNLST FPTTTMCSND 180 FEFSTLVAPH KQTSVPPMIY SFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 5e-25 | C2H2 family protein |