PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443214.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 320aa MW: 35137.9 Da PI: 6.9902

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.8	4.4e-44	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll+++ +++reda++sl+yeAear+rdPvyG+vgvi++lq++l+q++++l XP_026443214.1 8 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNEITPTQREDAVNSLAYEAEARLRDPVYGCVGVISTLQHRLKQVEHDLY 102 7********************************************************************************************99 PP DUF260 96 llkee 100 +k+e XP_026443214.1 103 NAKKE 107 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MTSSSNSPCA ACKFLRRKCT QECVFAPYFP PDQPQKFANV HKVFGASNVA KLLNEITPTQ 60 REDAVNSLAY EAEARLRDPV YGCVGVISTL QHRLKQVEHD LYNAKKELST FIGPAALLPL 120 AQHPHHPHHH PLLHHAQNPN SPVGVVSGGG AYGISSLGLG LPTGPTQQAH LLMREQQQQQ 180 QQHIIDPQIL AAAIAAREQQ DMMRSYEQQQ QQQQQELVRF NGGFDGGANG NGGGGVLFNQ 240 MGSGVPSPLS LITFDNNNNN NNNSPFQIQQ QQQQQHIQEN HHQPQQHQQQ QPPQLQIQPE 300 TPQQQRSGSD EGTSVGGPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-67	LBD family protein