PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443132.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 911aa MW: 105224 Da PI: 7.6093

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.6	8.3e-18	91	176	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA ++GFsvrks+++ ++g+ +r +vCs +g+ree+k++ ++ +++raetr g a++k++++ d k++v+k+ H+H XP_026443132.1 91 KFYNAYAFMMGFSVRKSRTHLF-QDGKLRDRLYVCSAQGTREEDKRD-DTVQNHRAETRFGFLAEMKINRTPDCKYRVSKFFPYHTHV 176 6**************99998.7888*************999.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MEPDDLENAC PADKFIEGSQ TNRRLDFDQG IDLNTSLTDE LIEEPENTRN VDESIEEPTN 60 TRNVDLMHFR IRKEEIPVVG MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR 120 LYVCSAQGTR EEDKRDDTVQ NHRAETRFGF LAEMKINRTP DCKYRVSKFF PYHTHVTTTP 180 SKSHLFRSHR KLNIANAAQA DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT 240 KRTRKIKYGE TGGVLEYLQK MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV 300 VCFDTTFRKN KEGRPFAMFV GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP 360 KSIFTDQDAA MAKALASQWP ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY 420 EDEEEFTNAW FKMLEKYNLN GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL 480 VKRYVSYKYD LLRFFENFER LVDDRRYEEK RMDFRASQST PTLSFPVKIL KHAASVYTPA 540 VFKLFQIQLC RAHDCSFSCF NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF 600 EFAGYLCSHA LKILCVKDIK SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY 660 KELCRSYIQL ATRAAESEEV YEIAKLGLDT TLKEVDASLR GLTIQEDPIN KDITSETSDD 720 PKLVVTAIHN SYQAVKGIKT KEKATGTTSV RPKTALERAT QPKKPRQTVL DPHEHPSALP 780 HQIQQEPNSF TGTMGIYSSQ MLPMPSSTLI PQRSSHELPM HLPMSLPSHD FYMGTMPTLT 840 SVPIYSNPML QTTLPSNNVP QWYTGGSGGY NTTSNYQQHS NGMVNFLQEQ VQLQTRQGNE 900 QLNNLHPRSY Q

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MEPDDLENAC PADKFIEGSQ TNRRLDFDQG IDLNTSLTDE LIEEPENTRN VDESIEEPTN  60
TRNVDLMHFR IRKEEIPVVG MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR  120
LYVCSAQGTR EEDKRDDTVQ NHRAETRFGF LAEMKINRTP DCKYRVSKFF PYHTHVTTTP  180
SKSHLFRSHR KLNIANAAQA DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT  240
KRTRKIKYGE TGGVLEYLQK MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV  300
VCFDTTFRKN KEGRPFAMFV GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP  360
KSIFTDQDAA MAKALASQWP ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY  420
EDEEEFTNAW FKMLEKYNLN GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL  480
VKRYVSYKYD LLRFFENFER LVDDRRYEEK RMDFRASQST PTLSFPVKIL KHAASVYTPA  540
VFKLFQIQLC RAHDCSFSCF NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF  600
EFAGYLCSHA LKILCVKDIK SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY  660
KELCRSYIQL ATRAAESEEV YEIAKLGLDT TLKEVDASLR GLTIQEDPIN KDITSETSDD  720
PKLVVTAIHN SYQAVKGIKT KEKATGTTSV RPKTALERAT QPKKPRQTVL DPHEHPSALP  780
HQIQQEPNSF TGTMGIYSSQ MLPMPSSTLI PQRSSHELPM HLPMSLPSHD FYMGTMPTLT  840
SVPIYSNPML QTTLPSNNVP QWYTGGSGGY NTTSNYQQHS NGMVNFLQEQ VQLQTRQGNE  900
QLNNLHPRSY Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-129	FAR1 family protein