PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442994.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family WOX
Protein Properties Length: 326aa    MW: 36587.1 Da    PI: 4.0579
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox34.73.1e-11105161452
                     -SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFe....knrypsaeereeLAkkl....gLterqVkvWFqNrR 52 
                      +++++eq+++Le l++      r p+ +e+e+++++l    +++ ++V+ WFq r+
  XP_026442994.1 105 QWSPSEEQTRILEMLYNggisGVRSPTVQEIEQITSQLinygKVEVTDVYLWFQARK 161
                     79***************888669*******************************998 PP
2Wus_type_Homeobox66.55.1e-22104168465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyk...sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        t W+P++eQ +iLe+ly+   sG+r+P+ +ei++it++L +yGk+e + V+ WFQ rk   rqkq
     XP_026442994.1 104 TQWSPSEEQTRILEMLYNggiSGVRSPTVQEIEQITSQLINYGKVEVTDVYLWFQARKDPGRQKQ 168
                        68****************777889**********************************9999996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MFRLVTVDDP DVSNDDNQTE ENSSNENPET SDMSESDEVV KYELGIDGNQ SELPSSSSYE  60
MPNWIRQMLD SAAEFDPSSV DAFEQMQMLH NLSQATDELE FDGTQWSPSE EQTRILEMLY  120
NGGISGVRSP TVQEIEQITS QLINYGKVEV TDVYLWFQAR KDPGRQKQTL RLLSPTGMEG  180
LEITEPPTSP EISNRGGKGK AVPVEERSGL EEVVDMSSKM FGQKEGSDNS RVTYDSTGKL  240
LPINSEKQWE LIPLVEENID VRANIIFLDR DFLEEPDPHI PSQRDPSLPT VSSSTSSNRE  300
EESRPEGQNN IKTADAKHHP VHITMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.13e-17WOX family protein