PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441853.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CPP

Protein Properties

Length: 959aa MW: 104088 Da PI: 5.8707

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5.2e-16	543	581	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++gCnCkkskClk+YCeCfaag +Cs+ C+C +C+Nk e XP_026441853.1 543 CRGCNCKKSKCLKLYCECFAAGMYCSDFCSCVGCFNKPE 581 79**********************************976 PP
2	TCR	52.5	9.5e-17	622	660	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++ag+ Cs+ C+Ce+C+N XP_026441853.1 622 RHKRGCNCKKSKCLKKYCECYQAGVGCSDGCRCEGCQNA 660 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MDSPERTQIT SPSPVQDSPL FNFLSTLSPI KPVKSRNAAQ GFTEYNFPSP VFTSPRINPQ 60 RETGFSKGSQ CVLLSKMKPS VEEEAEGSFA SEQSITKSIG DGRTSCSSKE CNKDSEQTIP 120 RSSSGSVEEY LADTVVVGKA DVANSTTSTE LLVNQAHDVS HGCISSKENL ANLANDPVAK 180 DTEAEAVASH TLLETAEEDL LVTEPVSGEQ PAIVANQMEP TSVEADADRP ACSISLYHHG 240 LQDAEVSQQS ALECTRQLPC ESLQMTQAHD DRDEIQGVTY DGSVESSILY DCEEGNQQQR 300 GTLRRCLQFE TAQAQGNTFC NSSWNAPNDL NSRSPASSTD LEIGAPLQRK SRSASCSSQP 360 VNTSRRITSK KFTITTVTTI ETHEVGRSTR NSVISSAKVP MPSIGLHLNS IVNTSASSKF 420 IAKSCSSSHS RKTLCITEQD LHDNSANPSL SITTGKFSDT LDNNQQGSLA TARESAATFP 480 SSRDMNLMNE VLNFEEENVD HATPCDSWNT ASENSLRFEE FSEPPSKKRR KKTPQSIDSS 540 EGCRGCNCKK SKCLKLYCEC FAAGMYCSDF CSCVGCFNKP EYEATVLATR HQIESRNPDA 600 FAPKVLGTYK EIGNQVTPSS VRHKRGCNCK KSKCLKKYCE CYQAGVGCSD GCRCEGCQNA 660 FGVRGGYDES REMLYRKIED EKWDDSSGDK LEMANRSDLL QLELELPNPD NLSPLTPMFQ 720 SSNHGKDTAK SRLQASRYDP SPESESQLKT DQGTSDVITR DLESECSIAG RANPVLQRHD 780 ELTDLCDLTP LPNILSSRAK ASSSSSNSAG SAKASESHLH PGSVSLSSAA SHGWRGSPVT 840 PLPRLGVNKY PQEPDSDKST LCQIQEGDTP EILKDTRTPI KAVKASSPSQ KRVSPPQNHS 900 PEPRLTCSPS LIRSPSLTGS PSLTCSPSLK SGRKFVLRSI SAFPPLTPYS DPKGSRTDK

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MDSPERTQIT SPSPVQDSPL FNFLSTLSPI KPVKSRNAAQ GFTEYNFPSP VFTSPRINPQ  60
RETGFSKGSQ CVLLSKMKPS VEEEAEGSFA SEQSITKSIG DGRTSCSSKE CNKDSEQTIP  120
RSSSGSVEEY LADTVVVGKA DVANSTTSTE LLVNQAHDVS HGCISSKENL ANLANDPVAK  180
DTEAEAVASH TLLETAEEDL LVTEPVSGEQ PAIVANQMEP TSVEADADRP ACSISLYHHG  240
LQDAEVSQQS ALECTRQLPC ESLQMTQAHD DRDEIQGVTY DGSVESSILY DCEEGNQQQR  300
GTLRRCLQFE TAQAQGNTFC NSSWNAPNDL NSRSPASSTD LEIGAPLQRK SRSASCSSQP  360
VNTSRRITSK KFTITTVTTI ETHEVGRSTR NSVISSAKVP MPSIGLHLNS IVNTSASSKF  420
IAKSCSSSHS RKTLCITEQD LHDNSANPSL SITTGKFSDT LDNNQQGSLA TARESAATFP  480
SSRDMNLMNE VLNFEEENVD HATPCDSWNT ASENSLRFEE FSEPPSKKRR KKTPQSIDSS  540
EGCRGCNCKK SKCLKLYCEC FAAGMYCSDF CSCVGCFNKP EYEATVLATR HQIESRNPDA  600
FAPKVLGTYK EIGNQVTPSS VRHKRGCNCK KSKCLKKYCE CYQAGVGCSD GCRCEGCQNA  660
FGVRGGYDES REMLYRKIED EKWDDSSGDK LEMANRSDLL QLELELPNPD NLSPLTPMFQ  720
SSNHGKDTAK SRLQASRYDP SPESESQLKT DQGTSDVITR DLESECSIAG RANPVLQRHD  780
ELTDLCDLTP LPNILSSRAK ASSSSSNSAG SAKASESHLH PGSVSLSSAA SHGWRGSPVT  840
PLPRLGVNKY PQEPDSDKST LCQIQEGDTP EILKDTRTPI KAVKASSPSQ KRVSPPQNHS  900
PEPRLTCSPS LIRSPSLTGS PSLTCSPSLK SGRKFVLRSI SAFPPLTPYS DPKGSRTDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	527	531	KKRRK
2	527	532	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	9e-59	CPP family protein