PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440865.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 248aa    MW: 28293.8 Da    PI: 5.3266
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.71.1e-55651681101
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql++fw++q   ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl
  XP_026440865.1  65 QLQVFWSNQmqeIEHVNDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFL 159
                     89******9878899******************************************************************************** PP

           NF-YC  93 vdivprdel 101
                     vdivprd+l
  XP_026440865.1 160 VDIVPRDDL 168
                     *******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDKSGNQVPK QEQERQPTRE DASSPEFEQE TEIEASDSPR PPSFSGPQHQ LAYPPQVQHF  60
HQQQQLQVFW SNQMQEIEHV NDFKNHTLPL ARIKKIMKAD EDVRMISAEA PVVFAKACEL  120
FILELTLRSW IHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPRDDLKE DATLGFPRPA  180
EPLPCYFIPR VPQHPSQVGH PVLTYDAGAA HQPRPPVAAA FMPWAQPPPQ QQQGQQQPPQ  240
PQPQQTDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138144RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.18e-67NF-YC family protein