PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440219.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 518aa    MW: 58332 Da    PI: 6.8133
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.87.2e-2955139187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe++aL+++r++m+  +r++ lk+plWeevs+k+++ g++r++k+Ckek+en+ k++k++k+g++   +++ +t+++fdqlea
  XP_026440219.1  55 RWPRQETMALLKIRSDMDVIFRDSTLKGPLWEEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKDGRST--KQDGKTYRFFDQLEA 139
                     8*******************************************************************98..577788*******85 PP
2trihelix103.31.8e-32375459186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+k e+ aLi++r+++e +++++  k+plWeevs  m++ g++r++k+Ckekwen+nk+ykk+ke++kkr +e+s+tcpyfdqle
  XP_026440219.1 375 RWPKVEIEALIKMRTDLEAKYQDNGPKGPLWEEVSTGMKKLGYNRNAKRCKEKWENINKYYKKVKESNKKR-PEDSKTCPYFDQLE 459
                     8*********************************************************************8.99***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MSSLIGNSGG AAAATSSVNN ESGSMNVDFP ENERLRITAG GLSEEGDRNS SGGSRWPRQE  60
TMALLKIRSD MDVIFRDSTL KGPLWEEVSR KLADLGYHRN AKKCKEKFEN VYKYHKRTKD  120
GRSTKQDGKT YRFFDQLEAL ENQFPSSSSS SLPADIKQAS SLPPAATLMA PTDPITITNS  180
SQPTTITTAI PIPSKLPNIS TTTEFMTTSP STSSSMFSLG GEDSEGTPTQ NKKRKLTIFF  240
ENLMNGVIQK QETLQKEFLE AIEKYEHQRM VKEEQWKMQE LARINREHEI LIQERSIAAA  300
KDAAVIAFLQ KMSSSSTSQQ PTPSSNNNQI IPVPNLQEQE KIDDNPPPII RPSSDNNNNG  360
NKDENSFPPR ISSSRWPKVE IEALIKMRTD LEAKYQDNGP KGPLWEEVST GMKKLGYNRN  420
AKRCKEKWEN INKYYKKVKE SNKKRPEDSK TCPYFDQLEE LYKQKNNRRV ILHNNSSSEP  480
QQQTPEKGQE QEQDLDGDEG EDGYEIAVHK TSMGTAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-74Trihelix family protein