PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440201.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 439aa MW: 49398.4 Da PI: 5.959

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.3e-32	87	140	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F++ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_026440201.1 87 PRLRWTPDLHMCFIHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 140 8****************************************************7 PP
2	Myb_DNA-binding	49.1	1.3e-15	88	139	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_026440201.1 88 RLRWTPDLHMCFIHAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQMYR 139 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MKESTSAEGS NTNLYDDKKE GEEEDEEEEE EKEEVDDVLV VGDEAADGDD EPENGGCSSN 60 STVDESERKG NNNNSSGVRP YVRSKTPRLR WTPDLHMCFI HAVERLGGQE RATPKLVLQL 120 MNIKGLSIAH VKSHLQMYRS KKIDDRGQVI SEKGNHHLME GGDGYIYNFS QLPMLQGFNQ 180 MRPTMTSSST FGYGNYPWRG NGNWMASAPY MSMVANSRAK PPGIYGSVVE RIFGCNTSTI 240 STPNRNFHHI GSSTTSSSTH EQLKKVLHQK EQPLPHENEF RAKTLHDHES WKSRFRLSCS 300 TIDQPSNIFI NHGLQERGIN RSENPNPCYL QNDIGSSSNP KTNSVMKEEE GKVINTKRKA 360 SEYRDSSLDL NLSLKINTSD TNEKDSLEDE HDEVGNDLSL SLFSPCSSKR KRKKLKEGHD 420 DGDDRKEHEK LASTLNLTI

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MKESTSAEGS NTNLYDDKKE GEEEDEEEEE EKEEVDDVLV VGDEAADGDD EPENGGCSSN  60
STVDESERKG NNNNSSGVRP YVRSKTPRLR WTPDLHMCFI HAVERLGGQE RATPKLVLQL  120
MNIKGLSIAH VKSHLQMYRS KKIDDRGQVI SEKGNHHLME GGDGYIYNFS QLPMLQGFNQ  180
MRPTMTSSST FGYGNYPWRG NGNWMASAPY MSMVANSRAK PPGIYGSVVE RIFGCNTSTI  240
STPNRNFHHI GSSTTSSSTH EQLKKVLHQK EQPLPHENEF RAKTLHDHES WKSRFRLSCS  300
TIDQPSNIFI NHGLQERGIN RSENPNPCYL QNDIGSSSNP KTNSVMKEEE GKVINTKRKA  360
SEYRDSSLDL NLSLKINTSD TNEKDSLEDE HDEVGNDLSL SLFSPCSSKR KRKKLKEGHD  420
DGDDRKEHEK LASTLNLTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	409	417	KRKRKKLKE
2	409	430	KRKRKKLKEGHDDGDDRKEHEK
3	410	414	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-51	G2-like family protein