PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440062.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 287aa    MW: 32983.7 Da    PI: 8.614
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix401e-1226110186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +Liea  ++  +l+rg+l++++W+ev++++     +  + +++ +qCk++++ ++k+yk +k+          s++++f++l+
  XP_026440062.1  26 CWTEEATETLIEAWGNRYIQLSRGNLRQKDWKEVADAVndrqdSINKPRKTDIQCKNRIDTVKKKYKIEKAKPFP------SKWVFFTRLD 110
                     8*************************************88654444456799***************99987765......5799999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEAEDHRHHQ QQIRPYKGGG GGREDCWTEE ATETLIEAWG NRYIQLSRGN LRQKDWKEVA  60
DAVNDRQDSI NKPRKTDIQC KNRIDTVKKK YKIEKAKPFP SKWVFFTRLD NLIGSNSSAG  120
GAKKFIPPPI IRKSSPVNFN FRSSQNLDRN QNVPFFASGG GSTSKSRLNS VGSTESSYDD  180
EEEEEEDEEG EDLRFDDSYK GKRSADVDDS SDQTAFKELA KAITKFGETY ERIESLKQEQ  240
MMALERQKME LTKELEFQRM KMFMDAQFEI AKKKRPRHSS GGTGKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.13e-58Trihelix family protein